Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 AC140912.1-201ENST00000577171 1054 ntBASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 AL844908.2-201ENST00000609461 460 ntBASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 AC012317.2-201ENST00000623305 2251 ntBASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTCBQ9Y3I0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 CETN4P-206ENST00000642099 2168 ntBASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 ABALON-201ENST00000629058 1903 ntBASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 AC098614.1-201ENST00000368528 745 ntBASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 AC133963.1-201ENST00000504166 1679 ntBASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 AC104581.1-202ENST00000635932 2618 ntBASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTCBQ9Y3I0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 PRYP6-201ENST00000514804 343 ntBASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 IFT20-216ENST00000588477 774 ntTSL 5 BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTCBQ9Y3I0 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC21.22■□□□□ 0.99
RTCBQ9Y3I0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.22■□□□□ 0.99
RTCBQ9Y3I0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
RTCBQ9Y3I0 AC009113.1-201ENST00000570267 2443 ntBASIC21.22■□□□□ 0.99
RTCBQ9Y3I0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC21.22■□□□□ 0.99
RTCBQ9Y3I0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC21.22■□□□□ 0.99
RTCBQ9Y3I0 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC21.22■□□□□ 0.99
RTCBQ9Y3I0 RPL37AP1-201ENST00000412502 279 ntBASIC21.22■□□□□ 0.99
RTCBQ9Y3I0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC21.22■□□□□ 0.99
RTCBQ9Y3I0 MTND6P24-201ENST00000440466 518 ntBASIC21.22■□□□□ 0.99
RTCBQ9Y3I0 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC21.22■□□□□ 0.99
RTCBQ9Y3I0 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTCBQ9Y3I0 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC21.22■□□□□ 0.99
RTCBQ9Y3I0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC21.22■□□□□ 0.99
RTCBQ9Y3I0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC21.22■□□□□ 0.99
RTCBQ9Y3I0 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC21.22■□□□□ 0.99
RTCBQ9Y3I0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RTCBQ9Y3I0 AL589739.1-201ENST00000607720 493 ntBASIC21.22■□□□□ 0.99
RTCBQ9Y3I0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTCBQ9Y3I0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RTCBQ9Y3I0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RTCBQ9Y3I0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTCBQ9Y3I0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms