Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AC140658.5-201ENST00000438532 169 ntBASIC17.93■□□□□ 0.46
CDH9Q9ULB4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.93■□□□□ 0.46
CDH9Q9ULB4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH9Q9ULB4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH9Q9ULB4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.93■□□□□ 0.46
CDH9Q9ULB4 AC091812.2-201ENST00000619081 385 ntBASIC17.93■□□□□ 0.46
CDH9Q9ULB4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.93■□□□□ 0.46
CDH9Q9ULB4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH9Q9ULB4 AC092919.2-201ENST00000623631 1645 ntBASIC17.93■□□□□ 0.46
CDH9Q9ULB4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH9Q9ULB4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.93■□□□□ 0.46
CDH9Q9ULB4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH9Q9ULB4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH9Q9ULB4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH9Q9ULB4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.93■□□□□ 0.46
CDH9Q9ULB4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH9Q9ULB4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 AC131009.4-201ENST00000624048 1740 ntBASIC17.92■□□□□ 0.46
CDH9Q9ULB4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 AC108860.2-201ENST00000562760 2183 ntBASIC17.92■□□□□ 0.46
CDH9Q9ULB4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 AC087641.1-201ENST00000557561 1021 ntBASIC17.92■□□□□ 0.46
CDH9Q9ULB4 MIR4469-201ENST00000583919 79 ntBASIC17.92■□□□□ 0.46
CDH9Q9ULB4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 AP001350.2-201ENST00000625104 1094 ntBASIC17.92■□□□□ 0.46
CDH9Q9ULB4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH9Q9ULB4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 AC002056.1-201ENST00000395613 760 ntBASIC17.91■□□□□ 0.46
CDH9Q9ULB4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 AC211486.1-202ENST00000416371 468 ntBASIC17.91■□□□□ 0.46
CDH9Q9ULB4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 ACTG1P14-201ENST00000446382 1122 ntBASIC17.91■□□□□ 0.46
CDH9Q9ULB4 AC211476.1-201ENST00000503899 468 ntBASIC17.91■□□□□ 0.46
CDH9Q9ULB4 AC112191.1-201ENST00000523689 701 ntBASIC17.91■□□□□ 0.46
CDH9Q9ULB4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.91■□□□□ 0.46
CDH9Q9ULB4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 AL691403.2-201ENST00000618460 490 ntBASIC17.91■□□□□ 0.46
CDH9Q9ULB4 ELL2P1-201ENST00000413990 1906 ntBASIC17.91■□□□□ 0.46
CDH9Q9ULB4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH9Q9ULB4 AL121761.2-201ENST00000598007 1648 ntBASIC17.9■□□□□ 0.46
CDH9Q9ULB4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms