Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 RAB43P1-201ENST00000561790 589 ntBASIC21.4■■□□□ 1.02
CCNL1Q9UK58 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 AL606495.2-201ENST00000605867 535 ntBASIC21.4■■□□□ 1.02
CCNL1Q9UK58 AC004790.1-201ENST00000612686 536 ntBASIC21.4■■□□□ 1.02
CCNL1Q9UK58 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 STX3-203ENST00000529177 1571 ntTSL 2 BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC21.39■■□□□ 1.02
CCNL1Q9UK58 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
CCNL1Q9UK58 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.39■■□□□ 1.02
CCNL1Q9UK58 BTBD7P1-201ENST00000447253 1453 ntBASIC21.39■■□□□ 1.02
CCNL1Q9UK58 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CCNL1Q9UK58 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCNL1Q9UK58 AC093503.3-201ENST00000624917 2352 ntBASIC21.39■■□□□ 1.02
CCNL1Q9UK58 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCNL1Q9UK58 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.39■■□□□ 1.02
CCNL1Q9UK58 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC21.39■■□□□ 1.01
CCNL1Q9UK58 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCNL1Q9UK58 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCNL1Q9UK58 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCNL1Q9UK58 SPDYE19P-201ENST00000338590 713 ntBASIC21.39■■□□□ 1.01
CCNL1Q9UK58 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCNL1Q9UK58 FAM220BP-201ENST00000377689 816 ntBASIC21.39■■□□□ 1.01
CCNL1Q9UK58 AL080243.2-201ENST00000418783 582 ntBASIC21.39■■□□□ 1.01
CCNL1Q9UK58 AC245100.3-201ENST00000441281 285 ntBASIC21.39■■□□□ 1.01
CCNL1Q9UK58 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCNL1Q9UK58 AC106886.1-201ENST00000568660 600 ntBASIC21.39■■□□□ 1.01
CCNL1Q9UK58 AC105021.1-202ENST00000570572 669 ntBASIC21.39■■□□□ 1.01
CCNL1Q9UK58 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC21.39■■□□□ 1.01
CCNL1Q9UK58 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC21.39■■□□□ 1.01
CCNL1Q9UK58 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCNL1Q9UK58 AC090164.3-201ENST00000610780 2143 ntBASIC21.39■■□□□ 1.01
CCNL1Q9UK58 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC21.39■■□□□ 1.01
CCNL1Q9UK58 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCNL1Q9UK58 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.39■■□□□ 1.01
CCNL1Q9UK58 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCNL1Q9UK58 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.39■■□□□ 1.01
CCNL1Q9UK58 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCNL1Q9UK58 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.39■■□□□ 1.01
CCNL1Q9UK58 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.01
CCNL1Q9UK58 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.39■■□□□ 1.01
CCNL1Q9UK58 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CCNL1Q9UK58 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.38■■□□□ 1.01
CCNL1Q9UK58 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC21.38■■□□□ 1.01
CCNL1Q9UK58 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.38■■□□□ 1.01
CCNL1Q9UK58 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CCNL1Q9UK58 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC21.38■■□□□ 1.01
CCNL1Q9UK58 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCNL1Q9UK58 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCNL1Q9UK58 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCNL1Q9UK58 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CCNL1Q9UK58 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CCNL1Q9UK58 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC21.38■■□□□ 1.01
CCNL1Q9UK58 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CCNL1Q9UK58 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CCNL1Q9UK58 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC21.38■■□□□ 1.01
CCNL1Q9UK58 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CCNL1Q9UK58 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC21.38■■□□□ 1.01
CCNL1Q9UK58 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC21.38■■□□□ 1.01
CCNL1Q9UK58 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CCNL1Q9UK58 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC21.38■■□□□ 1.01
CCNL1Q9UK58 AL133215.2-201ENST00000609242 977 ntBASIC21.38■■□□□ 1.01
CCNL1Q9UK58 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC21.38■■□□□ 1.01
CCNL1Q9UK58 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC21.38■■□□□ 1.01
CCNL1Q9UK58 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 DOC2GP-202ENST00000514950 1163 ntBASIC21.37■■□□□ 1.01
CCNL1Q9UK58 ZNF890P-202ENST00000530367 1156 ntBASIC21.37■■□□□ 1.01
CCNL1Q9UK58 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC21.37■■□□□ 1.01
CCNL1Q9UK58 AL079307.3-201ENST00000556114 283 ntBASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms