Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HDAC6Q9UBN7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC6Q9UBN7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC6Q9UBN7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC6Q9UBN7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC6Q9UBN7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDAC6Q9UBN7 AL590787.1-201ENST00000568856 1315 ntBASIC19.25■□□□□ 0.67
HDAC6Q9UBN7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HDAC6Q9UBN7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 ACTG1P4-201ENST00000425123 1122 ntBASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 AC074386.1-202ENST00000463561 864 ntBASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDAC6Q9UBN7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HDAC6Q9UBN7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDAC6Q9UBN7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDAC6Q9UBN7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDAC6Q9UBN7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HDAC6Q9UBN7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HDAC6Q9UBN7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDAC6Q9UBN7 FAM58CP-201ENST00000435741 640 ntBASIC19.22■□□□□ 0.67
HDAC6Q9UBN7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HDAC6Q9UBN7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.22■□□□□ 0.67
HDAC6Q9UBN7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.22■□□□□ 0.67
HDAC6Q9UBN7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.22■□□□□ 0.67
HDAC6Q9UBN7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HDAC6Q9UBN7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.22■□□□□ 0.67
HDAC6Q9UBN7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.22■□□□□ 0.67
HDAC6Q9UBN7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.22■□□□□ 0.67
HDAC6Q9UBN7 AC023141.13-201ENST00000604991 943 ntBASIC19.22■□□□□ 0.67
HDAC6Q9UBN7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HDAC6Q9UBN7 CROCCP2-202ENST00000412962 2773 ntBASIC19.22■□□□□ 0.67
HDAC6Q9UBN7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
HDAC6Q9UBN7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDAC6Q9UBN7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms