Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 OR6D1P-202ENST00000641007 5290 ntBASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HMG20BQ9P0W2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 MKNK2P1-201ENST00000437526 628 ntBASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMG20BQ9P0W2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
HMG20BQ9P0W2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HMG20BQ9P0W2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.9
HMG20BQ9P0W2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 AC012313.1-201ENST00000593393 3059 ntBASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 AC211486.1-202ENST00000416371 468 ntBASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 RPS8P6-201ENST00000426177 609 ntBASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 AC211476.1-201ENST00000503899 468 ntBASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 AL031432.2-201ENST00000566714 459 ntBASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 AL928711.1-201ENST00000570165 459 ntBASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 AP002472.1-201ENST00000577490 586 ntBASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 AP001160.2-201ENST00000596071 487 ntBASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HMG20BQ9P0W2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms