Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHD8Q9HCK8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHD8Q9HCK8 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHD8Q9HCK8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.58■□□□□ 0.08
CHD8Q9HCK8 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHD8Q9HCK8 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHD8Q9HCK8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.58■□□□□ 0.08
CHD8Q9HCK8 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.58■□□□□ 0.08
CHD8Q9HCK8 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.58■□□□□ 0.08
CHD8Q9HCK8 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CHD8Q9HCK8 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
CHD8Q9HCK8 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.58■□□□□ 0.08
CHD8Q9HCK8 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.58■□□□□ 0.08
CHD8Q9HCK8 RN7SL828P-201ENST00000607615 303 ntBASIC15.58■□□□□ 0.08
CHD8Q9HCK8 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHD8Q9HCK8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHD8Q9HCK8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHD8Q9HCK8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHD8Q9HCK8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 UPF3AP2-201ENST00000457924 1132 ntBASIC15.57■□□□□ 0.08
CHD8Q9HCK8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 MIR5189-201ENST00000577370 114 ntBASIC15.57■□□□□ 0.08
CHD8Q9HCK8 RN7SL560P-201ENST00000577943 264 ntBASIC15.57■□□□□ 0.08
CHD8Q9HCK8 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CHD8Q9HCK8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 KRT8P12-202ENST00000472924 1397 ntBASIC15.56■□□□□ 0.08
CHD8Q9HCK8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 REXO1L11P-201ENST00000620964 1927 ntBASIC15.56■□□□□ 0.08
CHD8Q9HCK8 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 AC007969.1-201ENST00000433675 447 ntBASIC15.56■□□□□ 0.08
CHD8Q9HCK8 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.56■□□□□ 0.08
CHD8Q9HCK8 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHD8Q9HCK8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHD8Q9HCK8 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.55■□□□□ 0.08
CHD8Q9HCK8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.55■□□□□ 0.08
CHD8Q9HCK8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHD8Q9HCK8 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms