Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPF2Q9HAU5 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPF2Q9HAU5 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
UPF2Q9HAU5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.95■□□□□ 0.94
UPF2Q9HAU5 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.95■□□□□ 0.94
UPF2Q9HAU5 ATP5G1P1-201ENST00000448724 379 ntBASIC20.95■□□□□ 0.94
UPF2Q9HAU5 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
UPF2Q9HAU5 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.95■□□□□ 0.94
UPF2Q9HAU5 AC005332.3-201ENST00000589904 676 ntBASIC20.95■□□□□ 0.94
UPF2Q9HAU5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.95■□□□□ 0.94
UPF2Q9HAU5 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPF2Q9HAU5 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UPF2Q9HAU5 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
UPF2Q9HAU5 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPF2Q9HAU5 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
UPF2Q9HAU5 FUK-207ENST00000571514 3054 ntTSL 2 BASIC20.95■□□□□ 0.94
UPF2Q9HAU5 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
UPF2Q9HAU5 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPF2Q9HAU5 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
UPF2Q9HAU5 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPF2Q9HAU5 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPF2Q9HAU5 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 HLA-A-202ENST00000376806 1854 ntBASIC20.94■□□□□ 0.94
UPF2Q9HAU5 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 FRMD8P1-201ENST00000440433 1524 ntBASIC20.94■□□□□ 0.94
UPF2Q9HAU5 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 AC092597.1-201ENST00000487352 616 ntBASIC20.94■□□□□ 0.94
UPF2Q9HAU5 AC122714.2-201ENST00000502787 707 ntBASIC20.94■□□□□ 0.94
UPF2Q9HAU5 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UPF2Q9HAU5 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 TUBB8P12-201ENST00000308911 1335 ntBASIC20.93■□□□□ 0.94
UPF2Q9HAU5 TUBB7P-202ENST00000428444 1305 ntBASIC20.93■□□□□ 0.94
UPF2Q9HAU5 TUBB8P7-204ENST00000567960 1332 ntBASIC20.93■□□□□ 0.94
UPF2Q9HAU5 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPF2Q9HAU5 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UPF2Q9HAU5 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC20.92■□□□□ 0.94
UPF2Q9HAU5 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF2Q9HAU5 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms