Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NXF3Q9H4D5 AL021920.2-201ENST00000624828 1351 ntBASIC18.3■□□□□ 0.52
NXF3Q9H4D5 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.3■□□□□ 0.52
NXF3Q9H4D5 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.29■□□□□ 0.52
NXF3Q9H4D5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
NXF3Q9H4D5 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NXF3Q9H4D5 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NXF3Q9H4D5 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NXF3Q9H4D5 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NXF3Q9H4D5 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NXF3Q9H4D5 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NXF3Q9H4D5 TSEN15P1-201ENST00000423257 515 ntBASIC18.29■□□□□ 0.52
NXF3Q9H4D5 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.29■□□□□ 0.52
NXF3Q9H4D5 AC087641.1-201ENST00000557561 1021 ntBASIC18.29■□□□□ 0.52
NXF3Q9H4D5 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.29■□□□□ 0.52
NXF3Q9H4D5 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NXF3Q9H4D5 AC093028.1-201ENST00000622998 982 ntBASIC18.29■□□□□ 0.52
NXF3Q9H4D5 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.29■□□□□ 0.52
NXF3Q9H4D5 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.29■□□□□ 0.52
NXF3Q9H4D5 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.29■□□□□ 0.52
NXF3Q9H4D5 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NXF3Q9H4D5 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NXF3Q9H4D5 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NXF3Q9H4D5 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NXF3Q9H4D5 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NXF3Q9H4D5 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NXF3Q9H4D5 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NXF3Q9H4D5 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NXF3Q9H4D5 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NXF3Q9H4D5 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.28■□□□□ 0.52
NXF3Q9H4D5 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 RNU1-129P-201ENST00000384064 167 ntBASIC18.28■□□□□ 0.52
NXF3Q9H4D5 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.28■□□□□ 0.52
NXF3Q9H4D5 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 AC093520.2-201ENST00000561830 333 ntBASIC18.28■□□□□ 0.52
NXF3Q9H4D5 AL135744.1-201ENST00000565098 629 ntBASIC18.28■□□□□ 0.52
NXF3Q9H4D5 RARRES2P8-201ENST00000566335 367 ntBASIC18.28■□□□□ 0.52
NXF3Q9H4D5 U1.21-201ENST00000580816 167 ntBASIC18.28■□□□□ 0.52
NXF3Q9H4D5 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 AL355385.1-201ENST00000606123 409 ntBASIC18.28■□□□□ 0.52
NXF3Q9H4D5 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 AC092068.3-201ENST00000587894 2016 ntBASIC18.28■□□□□ 0.52
NXF3Q9H4D5 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NXF3Q9H4D5 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 TFAMP1-201ENST00000412727 736 ntBASIC18.27■□□□□ 0.52
NXF3Q9H4D5 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 SPDYE11-202ENST00000450699 704 ntBASIC18.27■□□□□ 0.52
NXF3Q9H4D5 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 AC109635.5-201ENST00000533593 962 ntBASIC18.27■□□□□ 0.52
NXF3Q9H4D5 AC124947.2-201ENST00000547118 1133 ntBASIC18.27■□□□□ 0.52
NXF3Q9H4D5 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.27■□□□□ 0.52
NXF3Q9H4D5 SPDYE9P-201ENST00000570642 692 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms