Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 CGGBP1-203ENST00000462901 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 OR2A1-AS1-210ENST00000496968 531 ntBASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 AC006064.1-201ENST00000499202 560 ntTSL 4 BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 AC025459.1-201ENST00000504072 156 ntBASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 NACAP5-201ENST00000509863 636 ntBASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 OR10J9P-201ENST00000511932 987 ntBASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 RNU6-232P-201ENST00000517144 64 ntBASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 AC103834.1-201ENST00000520383 144 ntBASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 OXR1-212ENST00000521592 993 ntTSL 5 BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 SEC11A-203ENST00000558134 971 ntTSL 3 BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 ZFAND6-220ENST00000561060 891 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 AC006006.1-201ENST00000603082 144 ntBASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 AP002345.2-201ENST00000609961 904 ntBASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 AC004836.1-201ENST00000623032 634 ntBASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 AC099654.12-201ENST00000639868 649 ntBASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 RSRC1-215ENST00000611884 1738 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 AC005229.4-201ENST00000610085 2198 ntBASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 CR381670.1-201ENST00000624291 1693 ntBASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 COX17-201ENST00000261070 684 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 PARK7-202ENST00000377488 783 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 RNU4-70P-201ENST00000384579 139 ntBASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 FAM96AP2-201ENST00000414727 477 ntBASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 UBTFL3-201ENST00000418934 1024 ntBASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 AL049610.1-201ENST00000423374 372 ntBASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 MOB1AP1-201ENST00000430903 535 ntBASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 AC095030.1-201ENST00000436206 377 ntTSL 3 BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 AL139287.1-201ENST00000444968 386 ntTSL 3 BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 PSMA2-204ENST00000445517 683 ntTSL 2 BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 AL662789.1-201ENST00000448198 724 ntTSL 2 BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 AL391883.1-201ENST00000454736 447 ntTSL 2 BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 NIFKP2-201ENST00000513462 856 ntBASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 AC099509.2-201ENST00000513926 406 ntTSL 3 BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 SNORA20.3-201ENST00000516880 132 ntBASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 HTR4-210ENST00000521735 1242 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 OR4A2P-201ENST00000527276 913 ntBASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 MED28P5-201ENST00000528254 438 ntBASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 AP001781.2-201ENST00000529841 783 ntTSL 3 BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 PSMA3P-201ENST00000555485 635 ntBASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 AC110027.1-201ENST00000557753 403 ntBASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 DUX4L4-201ENST00000566884 1269 ntBASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 EXOGP1-201ENST00000580616 997 ntBASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 Z82195.1-201ENST00000604558 398 ntBASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 AC007014.2-201ENST00000615581 479 ntBASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 AC073585.1-201ENST00000368895 1328 ntBASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 LETMD1-228ENST00000550929 1389 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 NOSTRIN-203ENST00000397209 1437 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 MTCO1P18-201ENST00000455518 1419 ntBASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC10.73□□□□□ -0.69
KRTAP3-3Q9BYR6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC10.73□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms