Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.86□□□□□ -0.19
RAB40CQ96S21 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40CQ96S21 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
RAB40CQ96S21 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RAB40CQ96S21 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
RAB40CQ96S21 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.85□□□□□ -0.19
RAB40CQ96S21 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 NORAD-201ENST00000565493 5339 ntBASIC13.85□□□□□ -0.19
RAB40CQ96S21 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 AC092364.2-201ENST00000596710 2692 ntBASIC13.85□□□□□ -0.19
RAB40CQ96S21 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 AC010460.3-201ENST00000511359 1579 ntBASIC13.85□□□□□ -0.19
RAB40CQ96S21 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
RAB40CQ96S21 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC13.85□□□□□ -0.19
RAB40CQ96S21 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC13.85□□□□□ -0.19
RAB40CQ96S21 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC13.85□□□□□ -0.19
RAB40CQ96S21 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.85□□□□□ -0.19
RAB40CQ96S21 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.85□□□□□ -0.19
RAB40CQ96S21 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
RAB40CQ96S21 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
RAB40CQ96S21 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RAB40CQ96S21 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.85□□□□□ -0.19
RAB40CQ96S21 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.85□□□□□ -0.19
RAB40CQ96S21 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RAB40CQ96S21 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
RAB40CQ96S21 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40CQ96S21 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RAB40CQ96S21 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RAB40CQ96S21 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB40CQ96S21 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
RAB40CQ96S21 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.84□□□□□ -0.19
RAB40CQ96S21 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 MST1L-201ENST00000442552 2185 ntBASIC13.84□□□□□ -0.19
RAB40CQ96S21 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.84□□□□□ -0.19
RAB40CQ96S21 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 CD81-212ENST00000526072 1172 ntTSL 5 BASIC13.84□□□□□ -0.19
RAB40CQ96S21 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.84□□□□□ -0.19
RAB40CQ96S21 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 AC111152.3-201ENST00000569699 673 ntBASIC13.84□□□□□ -0.19
RAB40CQ96S21 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 AC073912.3-201ENST00000624414 853 ntBASIC13.84□□□□□ -0.19
RAB40CQ96S21 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
RAB40CQ96S21 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB40CQ96S21 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB40CQ96S21 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB40CQ96S21 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB40CQ96S21 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
RAB40CQ96S21 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAB40CQ96S21 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC13.84□□□□□ -0.19
RAB40CQ96S21 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms