Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 REXO1L6P-202ENST00000619970 1078 ntBASIC16.14■□□□□ 0.17
COL21A1Q96P44 AL691432.3-201ENST00000621860 400 ntBASIC16.14■□□□□ 0.17
COL21A1Q96P44 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
COL21A1Q96P44 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 CICP6-201ENST00000457191 2729 ntBASIC16.14■□□□□ 0.17
COL21A1Q96P44 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.14■□□□□ 0.17
COL21A1Q96P44 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
COL21A1Q96P44 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL21A1Q96P44 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL21A1Q96P44 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL21A1Q96P44 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL21A1Q96P44 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.13■□□□□ 0.17
COL21A1Q96P44 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL21A1Q96P44 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL21A1Q96P44 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL21A1Q96P44 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL21A1Q96P44 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL21A1Q96P44 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.13■□□□□ 0.17
COL21A1Q96P44 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL21A1Q96P44 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL21A1Q96P44 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.13■□□□□ 0.17
COL21A1Q96P44 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
COL21A1Q96P44 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL21A1Q96P44 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL21A1Q96P44 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL21A1Q96P44 AC008894.3-201ENST00000624324 3103 ntBASIC16.13■□□□□ 0.17
COL21A1Q96P44 AP005117.1-201ENST00000584346 1413 ntBASIC16.13■□□□□ 0.17
COL21A1Q96P44 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.13■□□□□ 0.17
COL21A1Q96P44 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL21A1Q96P44 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL21A1Q96P44 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL21A1Q96P44 AC003669.1-201ENST00000334569 611 ntBASIC16.13■□□□□ 0.17
COL21A1Q96P44 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.13■□□□□ 0.17
COL21A1Q96P44 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.13■□□□□ 0.17
COL21A1Q96P44 SAPCD2P3-201ENST00000455031 850 ntBASIC16.13■□□□□ 0.17
COL21A1Q96P44 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
COL21A1Q96P44 STK25P1-201ENST00000585406 838 ntBASIC16.13■□□□□ 0.17
COL21A1Q96P44 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL21A1Q96P44 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.13■□□□□ 0.17
COL21A1Q96P44 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.13■□□□□ 0.17
COL21A1Q96P44 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL21A1Q96P44 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL21A1Q96P44 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
COL21A1Q96P44 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL21A1Q96P44 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL21A1Q96P44 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
COL21A1Q96P44 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL21A1Q96P44 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.13■□□□□ 0.17
COL21A1Q96P44 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.13■□□□□ 0.17
COL21A1Q96P44 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL21A1Q96P44 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.12■□□□□ 0.17
COL21A1Q96P44 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL21A1Q96P44 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
COL21A1Q96P44 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
COL21A1Q96P44 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.12■□□□□ 0.17
COL21A1Q96P44 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.12■□□□□ 0.17
COL21A1Q96P44 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL21A1Q96P44 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
COL21A1Q96P44 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
COL21A1Q96P44 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL21A1Q96P44 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.12■□□□□ 0.17
COL21A1Q96P44 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL21A1Q96P44 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL21A1Q96P44 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL21A1Q96P44 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL21A1Q96P44 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
COL21A1Q96P44 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.12■□□□□ 0.17
COL21A1Q96P44 KLF4P1-201ENST00000412782 1185 ntBASIC16.12■□□□□ 0.17
COL21A1Q96P44 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.12■□□□□ 0.17
COL21A1Q96P44 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL21A1Q96P44 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.12■□□□□ 0.17
COL21A1Q96P44 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.12■□□□□ 0.17
COL21A1Q96P44 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL21A1Q96P44 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL21A1Q96P44 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL21A1Q96P44 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL21A1Q96P44 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL21A1Q96P44 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
COL21A1Q96P44 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.12■□□□□ 0.17
COL21A1Q96P44 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL21A1Q96P44 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.12■□□□□ 0.17
COL21A1Q96P44 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL21A1Q96P44 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL21A1Q96P44 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL21A1Q96P44 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
COL21A1Q96P44 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL21A1Q96P44 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.12■□□□□ 0.17
COL21A1Q96P44 AC132938.5-201ENST00000624980 1813 ntBASIC16.12■□□□□ 0.17
COL21A1Q96P44 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.12■□□□□ 0.17
COL21A1Q96P44 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
COL21A1Q96P44 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms