Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX11Q96FC9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
DDX11Q96FC9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX11Q96FC9 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DDX11Q96FC9 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC20.23■□□□□ 0.83
DDX11Q96FC9 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX11Q96FC9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.23■□□□□ 0.83
DDX11Q96FC9 AL135999.2-201ENST00000622438 1686 ntBASIC20.23■□□□□ 0.83
DDX11Q96FC9 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DDX11Q96FC9 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX11Q96FC9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DDX11Q96FC9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX11Q96FC9 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DDX11Q96FC9 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX11Q96FC9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX11Q96FC9 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DDX11Q96FC9 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
DDX11Q96FC9 PRYP5-201ENST00000451909 266 ntBASIC20.23■□□□□ 0.83
DDX11Q96FC9 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX11Q96FC9 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.23■□□□□ 0.83
DDX11Q96FC9 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.23■□□□□ 0.83
DDX11Q96FC9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
DDX11Q96FC9 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.23■□□□□ 0.83
DDX11Q96FC9 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.23■□□□□ 0.83
DDX11Q96FC9 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DDX11Q96FC9 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.23■□□□□ 0.83
DDX11Q96FC9 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.23■□□□□ 0.83
DDX11Q96FC9 AC009336.1-201ENST00000608941 1553 ntBASIC20.23■□□□□ 0.83
DDX11Q96FC9 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.23■□□□□ 0.83
DDX11Q96FC9 AC073592.4-201ENST00000623827 446 ntBASIC20.23■□□□□ 0.83
DDX11Q96FC9 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX11Q96FC9 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.23■□□□□ 0.83
DDX11Q96FC9 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DDX11Q96FC9 AL121761.2-201ENST00000598007 1648 ntBASIC20.23■□□□□ 0.83
DDX11Q96FC9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
DDX11Q96FC9 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX11Q96FC9 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.23■□□□□ 0.83
DDX11Q96FC9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX11Q96FC9 AC005915.1-201ENST00000624912 2018 ntBASIC20.22■□□□□ 0.83
DDX11Q96FC9 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
DDX11Q96FC9 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.22■□□□□ 0.83
DDX11Q96FC9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX11Q96FC9 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
DDX11Q96FC9 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX11Q96FC9 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX11Q96FC9 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX11Q96FC9 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX11Q96FC9 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX11Q96FC9 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX11Q96FC9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.22■□□□□ 0.83
DDX11Q96FC9 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX11Q96FC9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
DDX11Q96FC9 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
DDX11Q96FC9 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.22■□□□□ 0.83
DDX11Q96FC9 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.22■□□□□ 0.83
DDX11Q96FC9 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX11Q96FC9 AC006557.2-201ENST00000592985 1240 ntBASIC20.22■□□□□ 0.83
DDX11Q96FC9 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
DDX11Q96FC9 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX11Q96FC9 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX11Q96FC9 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX11Q96FC9 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DDX11Q96FC9 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX11Q96FC9 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX11Q96FC9 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX11Q96FC9 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX11Q96FC9 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX11Q96FC9 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX11Q96FC9 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX11Q96FC9 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX11Q96FC9 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
DDX11Q96FC9 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC20.21■□□□□ 0.83
DDX11Q96FC9 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX11Q96FC9 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX11Q96FC9 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
DDX11Q96FC9 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX11Q96FC9 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX11Q96FC9 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
DDX11Q96FC9 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX11Q96FC9 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX11Q96FC9 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX11Q96FC9 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.21■□□□□ 0.83
DDX11Q96FC9 KLF4P1-201ENST00000412782 1185 ntBASIC20.21■□□□□ 0.83
DDX11Q96FC9 SPDYE21P-201ENST00000413323 827 ntBASIC20.21■□□□□ 0.83
DDX11Q96FC9 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DDX11Q96FC9 RNA5SP416-201ENST00000516838 111 ntBASIC20.21■□□□□ 0.83
DDX11Q96FC9 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.21■□□□□ 0.83
DDX11Q96FC9 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.21■□□□□ 0.83
DDX11Q96FC9 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.21■□□□□ 0.83
DDX11Q96FC9 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
DDX11Q96FC9 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.21■□□□□ 0.83
DDX11Q96FC9 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.21■□□□□ 0.83
DDX11Q96FC9 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DDX11Q96FC9 AC005593.1-201ENST00000624894 515 ntBASIC20.21■□□□□ 0.83
DDX11Q96FC9 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX11Q96FC9 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX11Q96FC9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
DDX11Q96FC9 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.21■□□□□ 0.83
DDX11Q96FC9 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX11Q96FC9 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms