Protein–RNA interactions for Protein: Q96DZ5

CLIP3, CAP-Gly domain-containing linker protein 3, humanhuman

Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3Q96DZ5 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 PGAM5P1-201ENST00000518923 814 ntBASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 AC040169.1-201ENST00000565382 521 ntBASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 MIR4751-201ENST00000578027 74 ntBASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 AC139530.3-201ENST00000620344 690 ntBASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 LINC00554-201ENST00000564841 3011 ntBASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 PCDHA1-201ENST00000378133 2726 ntBASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 AC134043.2-201ENST00000624206 2238 ntBASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLIP3Q96DZ5 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 AC005104.2-201ENST00000427818 678 ntBASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 RPS15P9-201ENST00000494093 319 ntBASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 AC064836.3-201ENST00000607928 673 ntBASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 AC008764.6-201ENST00000595909 2069 ntBASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLIP3Q96DZ5 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 LINC00982-205ENST00000420957 435 ntBASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 AC067852.2-201ENST00000590513 2313 ntBASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
CLIP3Q96DZ5 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
CLIP3Q96DZ5 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
CLIP3Q96DZ5 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms