Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRQ92834 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRQ92834 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRQ92834 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.82■□□□□ 0.92
RPGRQ92834 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRQ92834 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPGRQ92834 AC100757.3-201ENST00000622361 1406 ntBASIC20.81■□□□□ 0.92
RPGRQ92834 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPGRQ92834 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.81■□□□□ 0.92
RPGRQ92834 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPGRQ92834 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RPGRQ92834 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.81■□□□□ 0.92
RPGRQ92834 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC20.81■□□□□ 0.92
RPGRQ92834 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.81■□□□□ 0.92
RPGRQ92834 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC20.81■□□□□ 0.92
RPGRQ92834 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC20.81■□□□□ 0.92
RPGRQ92834 AC027307.3-201ENST00000594262 1100 ntBASIC20.81■□□□□ 0.92
RPGRQ92834 AC003101.2-201ENST00000612557 442 ntBASIC20.81■□□□□ 0.92
RPGRQ92834 AC018529.1-201ENST00000613063 361 ntBASIC20.81■□□□□ 0.92
RPGRQ92834 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPGRQ92834 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RPGRQ92834 TDG-209ENST00000544861 1387 ntTSL 2 BASIC20.81■□□□□ 0.92
RPGRQ92834 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.81■□□□□ 0.92
RPGRQ92834 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RPGRQ92834 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPGRQ92834 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RPGRQ92834 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.81■□□□□ 0.92
RPGRQ92834 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPGRQ92834 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
RPGRQ92834 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPGRQ92834 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPGRQ92834 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.81■□□□□ 0.92
RPGRQ92834 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPGRQ92834 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RPGRQ92834 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPGRQ92834 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RPGRQ92834 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.8■□□□□ 0.92
RPGRQ92834 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPGRQ92834 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPGRQ92834 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.8■□□□□ 0.92
RPGRQ92834 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPGRQ92834 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPGRQ92834 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPGRQ92834 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPGRQ92834 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPGRQ92834 AC105233.2-201ENST00000523697 349 ntBASIC20.8■□□□□ 0.92
RPGRQ92834 AF228730.5-201ENST00000530288 346 ntBASIC20.8■□□□□ 0.92
RPGRQ92834 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC20.8■□□□□ 0.92
RPGRQ92834 RARRES2P9-201ENST00000565168 469 ntBASIC20.8■□□□□ 0.92
RPGRQ92834 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC20.8■□□□□ 0.92
RPGRQ92834 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPGRQ92834 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC20.8■□□□□ 0.92
RPGRQ92834 AC021097.1-201ENST00000607902 574 ntBASIC20.8■□□□□ 0.92
RPGRQ92834 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RPGRQ92834 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPGRQ92834 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPGRQ92834 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPGRQ92834 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPGRQ92834 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPGRQ92834 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
RPGRQ92834 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPGRQ92834 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRQ92834 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRQ92834 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRQ92834 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRQ92834 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.79■□□□□ 0.92
RPGRQ92834 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.79■□□□□ 0.92
RPGRQ92834 AC093525.9-201ENST00000624961 1746 ntBASIC20.79■□□□□ 0.92
RPGRQ92834 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRQ92834 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
RPGRQ92834 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRQ92834 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRQ92834 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRQ92834 MRPS18AP1-201ENST00000414458 589 ntBASIC20.79■□□□□ 0.92
RPGRQ92834 AC142381.1-201ENST00000426099 345 ntBASIC20.79■□□□□ 0.92
RPGRQ92834 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC20.79■□□□□ 0.92
RPGRQ92834 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC20.79■□□□□ 0.92
RPGRQ92834 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.79■□□□□ 0.92
RPGRQ92834 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC20.79■□□□□ 0.92
RPGRQ92834 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC20.79■□□□□ 0.92
RPGRQ92834 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC20.79■□□□□ 0.92
RPGRQ92834 CYP2A7P1-201ENST00000595391 815 ntBASIC20.79■□□□□ 0.92
RPGRQ92834 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRQ92834 AL590560.3-201ENST00000623350 461 ntBASIC20.79■□□□□ 0.92
RPGRQ92834 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC20.79■□□□□ 0.92
RPGRQ92834 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRQ92834 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRQ92834 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRQ92834 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RPGRQ92834 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRQ92834 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRQ92834 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRQ92834 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRQ92834 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.79■□□□□ 0.92
RPGRQ92834 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRQ92834 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPGRQ92834 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPGRQ92834 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPGRQ92834 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.78■□□□□ 0.92
RPGRQ92834 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms