Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
GCN1Q92616 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GCN1Q92616 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GCN1Q92616 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
GCN1Q92616 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.58□□□□□ -0.08
GCN1Q92616 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
GCN1Q92616 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GCN1Q92616 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GCN1Q92616 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GCN1Q92616 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
GCN1Q92616 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.58□□□□□ -0.08
GCN1Q92616 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GCN1Q92616 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GCN1Q92616 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
GCN1Q92616 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
GCN1Q92616 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC14.58□□□□□ -0.08
GCN1Q92616 FTLP5-201ENST00000586853 534 ntBASIC14.58□□□□□ -0.08
GCN1Q92616 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.58□□□□□ -0.08
GCN1Q92616 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
GCN1Q92616 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
GCN1Q92616 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GCN1Q92616 BX276092.7-203ENST00000637198 1536 ntBASIC14.57□□□□□ -0.08
GCN1Q92616 AL353732.1-201ENST00000569618 1459 ntBASIC14.57□□□□□ -0.08
GCN1Q92616 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GCN1Q92616 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.57□□□□□ -0.08
GCN1Q92616 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC14.57□□□□□ -0.08
GCN1Q92616 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.57□□□□□ -0.08
GCN1Q92616 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.57□□□□□ -0.08
GCN1Q92616 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GCN1Q92616 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GCN1Q92616 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GCN1Q92616 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GCN1Q92616 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC14.57□□□□□ -0.08
GCN1Q92616 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
GCN1Q92616 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.57□□□□□ -0.08
GCN1Q92616 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GCN1Q92616 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.57□□□□□ -0.08
GCN1Q92616 ACTG1P3-201ENST00000431775 1114 ntBASIC14.57□□□□□ -0.08
GCN1Q92616 AC016694.1-201ENST00000434179 700 ntBASIC14.57□□□□□ -0.08
GCN1Q92616 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
GCN1Q92616 PRYP6-201ENST00000514804 343 ntBASIC14.57□□□□□ -0.08
GCN1Q92616 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.57□□□□□ -0.08
GCN1Q92616 RN7SL736P-201ENST00000613111 269 ntBASIC14.57□□□□□ -0.08
GCN1Q92616 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
GCN1Q92616 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GCN1Q92616 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.56□□□□□ -0.08
GCN1Q92616 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
GCN1Q92616 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GCN1Q92616 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GCN1Q92616 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
GCN1Q92616 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GCN1Q92616 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GCN1Q92616 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GCN1Q92616 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.56□□□□□ -0.08
GCN1Q92616 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GCN1Q92616 AL355864.2-201ENST00000447420 863 ntBASIC14.56□□□□□ -0.08
GCN1Q92616 CTBP2P4-201ENST00000513884 920 ntBASIC14.56□□□□□ -0.08
GCN1Q92616 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC14.56□□□□□ -0.08
GCN1Q92616 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC14.56□□□□□ -0.08
GCN1Q92616 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GCN1Q92616 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.56□□□□□ -0.08
GCN1Q92616 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GCN1Q92616 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
GCN1Q92616 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GCN1Q92616 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GCN1Q92616 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GCN1Q92616 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GCN1Q92616 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GCN1Q92616 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.56□□□□□ -0.08
GCN1Q92616 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
GCN1Q92616 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
GCN1Q92616 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.56□□□□□ -0.08
GCN1Q92616 AC145423.3-201ENST00000615987 467 ntBASIC14.56□□□□□ -0.08
GCN1Q92616 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
GCN1Q92616 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.56□□□□□ -0.08
GCN1Q92616 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
GCN1Q92616 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.56□□□□□ -0.08
GCN1Q92616 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.56□□□□□ -0.08
GCN1Q92616 AL032819.2-201ENST00000624543 2162 ntBASIC14.55□□□□□ -0.08
GCN1Q92616 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GCN1Q92616 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.55□□□□□ -0.08
GCN1Q92616 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GCN1Q92616 SLC22A20-204ENST00000530038 1673 ntBASIC14.55□□□□□ -0.08
GCN1Q92616 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GCN1Q92616 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GCN1Q92616 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.55□□□□□ -0.08
GCN1Q92616 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.55□□□□□ -0.08
GCN1Q92616 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC14.55□□□□□ -0.08
GCN1Q92616 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GCN1Q92616 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.55□□□□□ -0.08
GCN1Q92616 AC091167.2-201ENST00000579581 588 ntBASIC14.55□□□□□ -0.08
GCN1Q92616 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GCN1Q92616 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.55□□□□□ -0.08
GCN1Q92616 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.55□□□□□ -0.08
GCN1Q92616 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.55□□□□□ -0.08
GCN1Q92616 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
GCN1Q92616 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
GCN1Q92616 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
GCN1Q92616 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.55□□□□□ -0.08
GCN1Q92616 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms