Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CT55Q8WUE5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CT55Q8WUE5 AC131009.4-201ENST00000624048 1740 ntBASIC15.77■□□□□ 0.12
CT55Q8WUE5 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CT55Q8WUE5 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CT55Q8WUE5 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CT55Q8WUE5 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CT55Q8WUE5 AC016027.1-202ENST00000607927 1699 ntBASIC15.77■□□□□ 0.12
CT55Q8WUE5 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CT55Q8WUE5 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CT55Q8WUE5 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CT55Q8WUE5 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CT55Q8WUE5 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.77■□□□□ 0.12
CT55Q8WUE5 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
CT55Q8WUE5 PMS2P4-201ENST00000412466 1052 ntBASIC15.77■□□□□ 0.12
CT55Q8WUE5 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.77■□□□□ 0.12
CT55Q8WUE5 AC107890.1-201ENST00000422478 521 ntBASIC15.77■□□□□ 0.12
CT55Q8WUE5 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.77■□□□□ 0.12
CT55Q8WUE5 AC055876.3-201ENST00000431496 288 ntBASIC15.77■□□□□ 0.12
CT55Q8WUE5 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.77■□□□□ 0.12
CT55Q8WUE5 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.77■□□□□ 0.12
CT55Q8WUE5 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.77■□□□□ 0.12
CT55Q8WUE5 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.77■□□□□ 0.12
CT55Q8WUE5 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.77■□□□□ 0.12
CT55Q8WUE5 MIR3909-201ENST00000579518 119 ntBASIC15.77■□□□□ 0.12
CT55Q8WUE5 AC027307.2-201ENST00000591252 911 ntBASIC15.77■□□□□ 0.12
CT55Q8WUE5 AC138649.4-201ENST00000612222 287 ntBASIC15.77■□□□□ 0.12
CT55Q8WUE5 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CT55Q8WUE5 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.77■□□□□ 0.11
CT55Q8WUE5 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.77■□□□□ 0.11
CT55Q8WUE5 FRMD8P1-201ENST00000440433 1524 ntBASIC15.77■□□□□ 0.11
CT55Q8WUE5 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CT55Q8WUE5 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CT55Q8WUE5 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.77■□□□□ 0.11
CT55Q8WUE5 AC116353.5-201ENST00000638148 1699 ntBASIC15.76■□□□□ 0.11
CT55Q8WUE5 AL021920.2-201ENST00000624828 1351 ntBASIC15.76■□□□□ 0.11
CT55Q8WUE5 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CT55Q8WUE5 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CT55Q8WUE5 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CT55Q8WUE5 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
CT55Q8WUE5 AC008677.1-201ENST00000519230 1561 ntBASIC15.76■□□□□ 0.11
CT55Q8WUE5 AL138688.1-201ENST00000624851 1594 ntBASIC15.76■□□□□ 0.11
CT55Q8WUE5 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CT55Q8WUE5 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.76■□□□□ 0.11
CT55Q8WUE5 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CT55Q8WUE5 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CT55Q8WUE5 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
CT55Q8WUE5 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CT55Q8WUE5 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CT55Q8WUE5 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
CT55Q8WUE5 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.76■□□□□ 0.11
CT55Q8WUE5 BASP1P1-201ENST00000430708 665 ntBASIC15.76■□□□□ 0.11
CT55Q8WUE5 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.76■□□□□ 0.11
CT55Q8WUE5 INGX-202ENST00000489074 768 ntBASIC15.76■□□□□ 0.11
CT55Q8WUE5 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.76■□□□□ 0.11
CT55Q8WUE5 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.76■□□□□ 0.11
CT55Q8WUE5 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
CT55Q8WUE5 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CT55Q8WUE5 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.76■□□□□ 0.11
CT55Q8WUE5 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.76■□□□□ 0.11
CT55Q8WUE5 AJ011932.1-201ENST00000621707 465 ntBASIC15.76■□□□□ 0.11
CT55Q8WUE5 AC008267.7-201ENST00000624570 1194 ntBASIC15.76■□□□□ 0.11
CT55Q8WUE5 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.76■□□□□ 0.11
CT55Q8WUE5 AC084121.4-201ENST00000641598 221 ntBASIC15.76■□□□□ 0.11
CT55Q8WUE5 AF228730.8-201ENST00000642140 221 ntBASIC15.76■□□□□ 0.11
CT55Q8WUE5 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CT55Q8WUE5 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CT55Q8WUE5 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CT55Q8WUE5 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.76■□□□□ 0.11
CT55Q8WUE5 NOC2LP1-202ENST00000452600 2235 ntBASIC15.76■□□□□ 0.11
CT55Q8WUE5 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CT55Q8WUE5 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.76■□□□□ 0.11
CT55Q8WUE5 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.76■□□□□ 0.11
CT55Q8WUE5 KRT8P49-201ENST00000604166 1432 ntBASIC15.76■□□□□ 0.11
CT55Q8WUE5 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CT55Q8WUE5 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CT55Q8WUE5 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CT55Q8WUE5 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CT55Q8WUE5 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.75■□□□□ 0.11
CT55Q8WUE5 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CT55Q8WUE5 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
CT55Q8WUE5 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
CT55Q8WUE5 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CT55Q8WUE5 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CT55Q8WUE5 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.75■□□□□ 0.11
CT55Q8WUE5 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.75■□□□□ 0.11
CT55Q8WUE5 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CT55Q8WUE5 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CT55Q8WUE5 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.75■□□□□ 0.11
CT55Q8WUE5 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.75■□□□□ 0.11
CT55Q8WUE5 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.75■□□□□ 0.11
CT55Q8WUE5 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CT55Q8WUE5 SPDYE7P-202ENST00000420373 878 ntBASIC15.75■□□□□ 0.11
CT55Q8WUE5 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.75■□□□□ 0.11
CT55Q8WUE5 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CT55Q8WUE5 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.75■□□□□ 0.11
CT55Q8WUE5 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.75■□□□□ 0.11
CT55Q8WUE5 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.75■□□□□ 0.11
CT55Q8WUE5 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.75■□□□□ 0.11
CT55Q8WUE5 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms