Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 AL121912.1-201ENST00000603683 238 ntBASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
SIMC1Q8NDZ2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SIMC1Q8NDZ2 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.08■□□□□ 0.17
SIMC1Q8NDZ2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
SIMC1Q8NDZ2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SIMC1Q8NDZ2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SIMC1Q8NDZ2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SIMC1Q8NDZ2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SIMC1Q8NDZ2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SIMC1Q8NDZ2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SIMC1Q8NDZ2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.08■□□□□ 0.16
SIMC1Q8NDZ2 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
SIMC1Q8NDZ2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SIMC1Q8NDZ2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.08■□□□□ 0.16
SIMC1Q8NDZ2 HNRNPDP1-201ENST00000439535 754 ntBASIC16.08■□□□□ 0.16
SIMC1Q8NDZ2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.08■□□□□ 0.16
SIMC1Q8NDZ2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.08■□□□□ 0.16
SIMC1Q8NDZ2 AC104692.2-201ENST00000603054 253 ntBASIC16.08■□□□□ 0.16
SIMC1Q8NDZ2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SIMC1Q8NDZ2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
SIMC1Q8NDZ2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SIMC1Q8NDZ2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
SIMC1Q8NDZ2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SIMC1Q8NDZ2 EGFEM1P-202ENST00000431685 1563 ntBASIC16.08■□□□□ 0.16
SIMC1Q8NDZ2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SIMC1Q8NDZ2 AL121761.2-201ENST00000598007 1648 ntBASIC16.08■□□□□ 0.16
SIMC1Q8NDZ2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SIMC1Q8NDZ2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SIMC1Q8NDZ2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SIMC1Q8NDZ2 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SIMC1Q8NDZ2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 AC004870.1-201ENST00000315132 882 ntBASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 GPALPP1-207ENST00000611650 899 ntBASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SIMC1Q8NDZ2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms