Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF135Q8IUD6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 OR8S1-201ENST00000310194 1080 ntBASIC18.07■□□□□ 0.48
RNF135Q8IUD6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 CNN2P2-201ENST00000443536 909 ntBASIC18.07■□□□□ 0.48
RNF135Q8IUD6 CNN2P3-201ENST00000450201 906 ntBASIC18.07■□□□□ 0.48
RNF135Q8IUD6 TIMM8BP1-201ENST00000452384 211 ntBASIC18.07■□□□□ 0.48
RNF135Q8IUD6 UGT1A2P-201ENST00000454886 866 ntBASIC18.07■□□□□ 0.48
RNF135Q8IUD6 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 AL136317.3-201ENST00000618497 906 ntBASIC18.07■□□□□ 0.48
RNF135Q8IUD6 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RNF135Q8IUD6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 MIR943-201ENST00000401286 94 ntBASIC18.06■□□□□ 0.48
RNF135Q8IUD6 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 KLF4P1-201ENST00000412782 1185 ntBASIC18.06■□□□□ 0.48
RNF135Q8IUD6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 AL359881.2-201ENST00000602973 570 ntBASIC18.06■□□□□ 0.48
RNF135Q8IUD6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF135Q8IUD6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RNF135Q8IUD6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.05■□□□□ 0.48
RNF135Q8IUD6 AC006116.8-202ENST00000587620 1550 ntBASIC18.05■□□□□ 0.48
RNF135Q8IUD6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF135Q8IUD6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF135Q8IUD6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
RNF135Q8IUD6 AC003669.1-201ENST00000334569 611 ntBASIC18.05■□□□□ 0.48
RNF135Q8IUD6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF135Q8IUD6 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF135Q8IUD6 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RNF135Q8IUD6 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF135Q8IUD6 CXCL1P1-201ENST00000502804 216 ntBASIC18.05■□□□□ 0.48
RNF135Q8IUD6 AP005018.1-201ENST00000525475 301 ntBASIC18.05■□□□□ 0.48
RNF135Q8IUD6 AC051619.7-201ENST00000568314 623 ntBASIC18.05■□□□□ 0.48
RNF135Q8IUD6 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.05■□□□□ 0.48
RNF135Q8IUD6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.05■□□□□ 0.48
RNF135Q8IUD6 LINC02560-201ENST00000596379 459 ntBASIC18.05■□□□□ 0.48
RNF135Q8IUD6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF135Q8IUD6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF135Q8IUD6 AC008761.3-201ENST00000624803 892 ntBASIC18.05■□□□□ 0.48
RNF135Q8IUD6 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF135Q8IUD6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF135Q8IUD6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF135Q8IUD6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms