Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF43Q68DV7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.89■□□□□ 0.46
RNF43Q68DV7 NCF1C-201ENST00000438382 1427 ntBASIC17.89■□□□□ 0.46
RNF43Q68DV7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.46
RNF43Q68DV7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.89■□□□□ 0.46
RNF43Q68DV7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF43Q68DV7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.89■□□□□ 0.45
RNF43Q68DV7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF43Q68DV7 AGGF1P2-201ENST00000426656 2106 ntBASIC17.89■□□□□ 0.45
RNF43Q68DV7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.89■□□□□ 0.45
RNF43Q68DV7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RNF43Q68DV7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF43Q68DV7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF43Q68DV7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF43Q68DV7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF43Q68DV7 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF43Q68DV7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF43Q68DV7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF43Q68DV7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
RNF43Q68DV7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF43Q68DV7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
RNF43Q68DV7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF43Q68DV7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF43Q68DV7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF43Q68DV7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF43Q68DV7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF43Q68DV7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF43Q68DV7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF43Q68DV7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF43Q68DV7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF43Q68DV7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF43Q68DV7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF43Q68DV7 PCDH8P1-201ENST00000428983 2773 ntBASIC17.89■□□□□ 0.45
RNF43Q68DV7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RNF43Q68DV7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
RNF43Q68DV7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RNF43Q68DV7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF43Q68DV7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF43Q68DV7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF43Q68DV7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF43Q68DV7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF43Q68DV7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF43Q68DV7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF43Q68DV7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF43Q68DV7 CICP6-201ENST00000457191 2729 ntBASIC17.88■□□□□ 0.45
RNF43Q68DV7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF43Q68DV7 AL391005.1-201ENST00000623953 2435 ntBASIC17.88■□□□□ 0.45
RNF43Q68DV7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF43Q68DV7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
RNF43Q68DV7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF43Q68DV7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF43Q68DV7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.88■□□□□ 0.45
RNF43Q68DV7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.88■□□□□ 0.45
RNF43Q68DV7 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.88■□□□□ 0.45
RNF43Q68DV7 RNA5SP416-201ENST00000516838 111 ntBASIC17.88■□□□□ 0.45
RNF43Q68DV7 RNA5SP415-201ENST00000517246 115 ntBASIC17.88■□□□□ 0.45
RNF43Q68DV7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.88■□□□□ 0.45
RNF43Q68DV7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.88■□□□□ 0.45
RNF43Q68DV7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.88■□□□□ 0.45
RNF43Q68DV7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF43Q68DV7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF43Q68DV7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RNF43Q68DV7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RNF43Q68DV7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF43Q68DV7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
RNF43Q68DV7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
RNF43Q68DV7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RNF43Q68DV7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF43Q68DV7 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF43Q68DV7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RNF43Q68DV7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF43Q68DV7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF43Q68DV7 AC106886.4-201ENST00000623557 2502 ntBASIC17.87■□□□□ 0.45
RNF43Q68DV7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF43Q68DV7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.87■□□□□ 0.45
RNF43Q68DV7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RNF43Q68DV7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.87■□□□□ 0.45
RNF43Q68DV7 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.87■□□□□ 0.45
RNF43Q68DV7 DNAJB3-202ENST00000449667 1266 ntBASIC17.87■□□□□ 0.45
RNF43Q68DV7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.87■□□□□ 0.45
RNF43Q68DV7 AC136632.2-201ENST00000512891 861 ntBASIC17.87■□□□□ 0.45
RNF43Q68DV7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF43Q68DV7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.87■□□□□ 0.45
RNF43Q68DV7 AL353135.1-201ENST00000606729 504 ntBASIC17.87■□□□□ 0.45
RNF43Q68DV7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RNF43Q68DV7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF43Q68DV7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF43Q68DV7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF43Q68DV7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RNF43Q68DV7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
RNF43Q68DV7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF43Q68DV7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF43Q68DV7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF43Q68DV7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF43Q68DV7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
RNF43Q68DV7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF43Q68DV7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RNF43Q68DV7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF43Q68DV7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
RNF43Q68DV7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms