Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.33■□□□□ 0.85
RNF20Q5VTR2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF20Q5VTR2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RNF20Q5VTR2 AC006557.2-201ENST00000592985 1240 ntBASIC20.33■□□□□ 0.85
RNF20Q5VTR2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.33■□□□□ 0.85
RNF20Q5VTR2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF20Q5VTR2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF20Q5VTR2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF20Q5VTR2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF20Q5VTR2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF20Q5VTR2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
RNF20Q5VTR2 AC084018.2-201ENST00000613093 2607 ntBASIC20.33■□□□□ 0.84
RNF20Q5VTR2 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF20Q5VTR2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF20Q5VTR2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.33■□□□□ 0.84
RNF20Q5VTR2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.33■□□□□ 0.84
RNF20Q5VTR2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF20Q5VTR2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF20Q5VTR2 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
RNF20Q5VTR2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF20Q5VTR2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF20Q5VTR2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF20Q5VTR2 AC078925.2-201ENST00000624013 1973 ntBASIC20.32■□□□□ 0.84
RNF20Q5VTR2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF20Q5VTR2 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.32■□□□□ 0.84
RNF20Q5VTR2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF20Q5VTR2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.32■□□□□ 0.84
RNF20Q5VTR2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF20Q5VTR2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.32■□□□□ 0.84
RNF20Q5VTR2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF20Q5VTR2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RNF20Q5VTR2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RNF20Q5VTR2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RNF20Q5VTR2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RNF20Q5VTR2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RNF20Q5VTR2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF20Q5VTR2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RNF20Q5VTR2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF20Q5VTR2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF20Q5VTR2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF20Q5VTR2 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
RNF20Q5VTR2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF20Q5VTR2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF20Q5VTR2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF20Q5VTR2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 RNF216P1-203ENST00000404404 2427 ntBASIC20.31■□□□□ 0.84
RNF20Q5VTR2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 UNC93B7-201ENST00000509439 705 ntBASIC20.31■□□□□ 0.84
RNF20Q5VTR2 AC073648.2-201ENST00000510116 352 ntBASIC20.31■□□□□ 0.84
RNF20Q5VTR2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.31■□□□□ 0.84
RNF20Q5VTR2 AC107918.4-202ENST00000641623 219 ntBASIC20.31■□□□□ 0.84
RNF20Q5VTR2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 FLJ38576-201ENST00000623820 2459 ntBASIC20.31■□□□□ 0.84
RNF20Q5VTR2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF20Q5VTR2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF20Q5VTR2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF20Q5VTR2 TNRC18P3-201ENST00000441896 2691 ntBASIC20.3■□□□□ 0.84
RNF20Q5VTR2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF20Q5VTR2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF20Q5VTR2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF20Q5VTR2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF20Q5VTR2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RNF20Q5VTR2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF20Q5VTR2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF20Q5VTR2 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF20Q5VTR2 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF20Q5VTR2 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.3■□□□□ 0.84
RNF20Q5VTR2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.3■□□□□ 0.84
RNF20Q5VTR2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
RNF20Q5VTR2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RNF20Q5VTR2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF20Q5VTR2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RNF20Q5VTR2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF20Q5VTR2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF20Q5VTR2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms