Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC21.69■■□□□ 1.06
NUP188Q5SRE5 AC008735.3-201ENST00000596646 500 ntBASIC21.69■■□□□ 1.06
NUP188Q5SRE5 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NUP188Q5SRE5 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NUP188Q5SRE5 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
NUP188Q5SRE5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NUP188Q5SRE5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.69■■□□□ 1.06
NUP188Q5SRE5 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NUP188Q5SRE5 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NUP188Q5SRE5 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NUP188Q5SRE5 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC21.69■■□□□ 1.06
NUP188Q5SRE5 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC21.69■■□□□ 1.06
NUP188Q5SRE5 AC011495.1-201ENST00000498085 584 ntBASIC21.69■■□□□ 1.06
NUP188Q5SRE5 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC21.69■■□□□ 1.06
NUP188Q5SRE5 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NUP188Q5SRE5 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC21.69■■□□□ 1.06
NUP188Q5SRE5 MIR6775-201ENST00000617557 69 ntBASIC21.69■■□□□ 1.06
NUP188Q5SRE5 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
NUP188Q5SRE5 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
NUP188Q5SRE5 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.68■■□□□ 1.06
NUP188Q5SRE5 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC21.68■■□□□ 1.06
NUP188Q5SRE5 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC21.68■■□□□ 1.06
NUP188Q5SRE5 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NUP188Q5SRE5 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.68■■□□□ 1.06
NUP188Q5SRE5 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUP188Q5SRE5 AL390961.4-201ENST00000623958 2535 ntBASIC21.68■■□□□ 1.06
NUP188Q5SRE5 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUP188Q5SRE5 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC21.68■■□□□ 1.06
NUP188Q5SRE5 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC21.68■■□□□ 1.06
NUP188Q5SRE5 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC21.68■■□□□ 1.06
NUP188Q5SRE5 MTRF1LP2-201ENST00000506027 1122 ntBASIC21.68■■□□□ 1.06
NUP188Q5SRE5 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC21.68■■□□□ 1.06
NUP188Q5SRE5 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC21.68■■□□□ 1.06
NUP188Q5SRE5 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC21.68■■□□□ 1.06
NUP188Q5SRE5 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC21.68■■□□□ 1.06
NUP188Q5SRE5 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC21.68■■□□□ 1.06
NUP188Q5SRE5 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NUP188Q5SRE5 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUP188Q5SRE5 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NUP188Q5SRE5 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
NUP188Q5SRE5 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NUP188Q5SRE5 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
NUP188Q5SRE5 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
NUP188Q5SRE5 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC21.67■■□□□ 1.06
NUP188Q5SRE5 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NUP188Q5SRE5 GNAQP1-201ENST00000444815 1067 ntBASIC21.67■■□□□ 1.06
NUP188Q5SRE5 AC135586.1-201ENST00000539323 574 ntBASIC21.67■■□□□ 1.06
NUP188Q5SRE5 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.67■■□□□ 1.06
NUP188Q5SRE5 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.67■■□□□ 1.06
NUP188Q5SRE5 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NUP188Q5SRE5 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
NUP188Q5SRE5 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NUP188Q5SRE5 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUP188Q5SRE5 CENPM-206ENST00000407253 818 ntTSL 2 BASIC21.66■■□□□ 1.06
NUP188Q5SRE5 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NUP188Q5SRE5 MFF-223ENST00000524634 647 ntTSL 2 BASIC21.66■■□□□ 1.06
NUP188Q5SRE5 FUZ-207ENST00000526575 482 ntTSL 4 BASIC21.66■■□□□ 1.06
NUP188Q5SRE5 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC21.66■■□□□ 1.06
NUP188Q5SRE5 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC21.66■■□□□ 1.06
NUP188Q5SRE5 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC21.66■■□□□ 1.06
NUP188Q5SRE5 AC133552.6-201ENST00000613406 534 ntBASIC21.66■■□□□ 1.06
NUP188Q5SRE5 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
NUP188Q5SRE5 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.66■■□□□ 1.06
NUP188Q5SRE5 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
NUP188Q5SRE5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NUP188Q5SRE5 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUP188Q5SRE5 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC21.66■■□□□ 1.06
NUP188Q5SRE5 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
NUP188Q5SRE5 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC21.66■■□□□ 1.06
NUP188Q5SRE5 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUP188Q5SRE5 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC21.66■■□□□ 1.06
NUP188Q5SRE5 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUP188Q5SRE5 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC21.66■■□□□ 1.06
NUP188Q5SRE5 RASL12-203ENST00000434605 982 ntTSL 2 BASIC21.66■■□□□ 1.06
NUP188Q5SRE5 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC21.66■■□□□ 1.06
NUP188Q5SRE5 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC21.66■■□□□ 1.06
NUP188Q5SRE5 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC21.66■■□□□ 1.06
NUP188Q5SRE5 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUP188Q5SRE5 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.66■■□□□ 1.06
NUP188Q5SRE5 CETN4P-206ENST00000642099 2168 ntBASIC21.66■■□□□ 1.06
NUP188Q5SRE5 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NUP188Q5SRE5 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NUP188Q5SRE5 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NUP188Q5SRE5 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.65■■□□□ 1.06
NUP188Q5SRE5 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.65■■□□□ 1.06
NUP188Q5SRE5 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC21.65■■□□□ 1.06
NUP188Q5SRE5 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
NUP188Q5SRE5 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NUP188Q5SRE5 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NUP188Q5SRE5 AC093004.1-201ENST00000508850 424 ntBASIC21.65■■□□□ 1.06
NUP188Q5SRE5 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NUP188Q5SRE5 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
NUP188Q5SRE5 AC099568.2-201ENST00000609194 695 ntBASIC21.65■■□□□ 1.06
NUP188Q5SRE5 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NUP188Q5SRE5 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NUP188Q5SRE5 EGFEM1P-202ENST00000431685 1563 ntBASIC21.65■■□□□ 1.06
NUP188Q5SRE5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NUP188Q5SRE5 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
NUP188Q5SRE5 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NUP188Q5SRE5 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms