Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
CCDC93Q567U6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CCDC93Q567U6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC93Q567U6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CCDC93Q567U6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC93Q567U6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CCDC93Q567U6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC93Q567U6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC93Q567U6 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC93Q567U6 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC93Q567U6 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC93Q567U6 CALY-202ENST00000368555 783 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC93Q567U6 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC93Q567U6 RNU1-129P-201ENST00000384064 167 ntBASIC20.78■□□□□ 0.92
CCDC93Q567U6 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC93Q567U6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC93Q567U6 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC93Q567U6 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC93Q567U6 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC93Q567U6 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC93Q567U6 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC93Q567U6 U1.21-201ENST00000580816 167 ntBASIC20.78■□□□□ 0.92
CCDC93Q567U6 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC93Q567U6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CCDC93Q567U6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC93Q567U6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC93Q567U6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC93Q567U6 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC93Q567U6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC93Q567U6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC93Q567U6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC93Q567U6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC93Q567U6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC93Q567U6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC93Q567U6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
CCDC93Q567U6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CCDC93Q567U6 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC93Q567U6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC93Q567U6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC93Q567U6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC93Q567U6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC93Q567U6 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC93Q567U6 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC93Q567U6 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC93Q567U6 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
CCDC93Q567U6 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC93Q567U6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC93Q567U6 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC93Q567U6 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC93Q567U6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC93Q567U6 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC93Q567U6 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC93Q567U6 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CCDC93Q567U6 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC93Q567U6 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC93Q567U6 LINC01451-201ENST00000623792 534 ntBASIC20.77■□□□□ 0.92
CCDC93Q567U6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC93Q567U6 FZD10-202ENST00000539839 3282 ntBASIC20.77■□□□□ 0.91
CCDC93Q567U6 AC022144.1-201ENST00000602255 1580 ntBASIC20.76■□□□□ 0.91
CCDC93Q567U6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CCDC93Q567U6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCDC93Q567U6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC93Q567U6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC93Q567U6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC93Q567U6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC93Q567U6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC93Q567U6 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC20.76■□□□□ 0.91
CCDC93Q567U6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC93Q567U6 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC93Q567U6 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC20.76■□□□□ 0.91
CCDC93Q567U6 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC93Q567U6 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CCDC93Q567U6 MIR3909-201ENST00000579518 119 ntBASIC20.76■□□□□ 0.91
CCDC93Q567U6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC20.76■□□□□ 0.91
CCDC93Q567U6 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC20.76■□□□□ 0.91
CCDC93Q567U6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC93Q567U6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC93Q567U6 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC93Q567U6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CCDC93Q567U6 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC93Q567U6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC93Q567U6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC93Q567U6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC93Q567U6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC93Q567U6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC93Q567U6 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CCDC93Q567U6 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.75■□□□□ 0.91
CCDC93Q567U6 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC93Q567U6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC93Q567U6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20.75■□□□□ 0.91
CCDC93Q567U6 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC20.75■□□□□ 0.91
CCDC93Q567U6 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
CCDC93Q567U6 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC20.75■□□□□ 0.91
CCDC93Q567U6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC93Q567U6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC93Q567U6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC93Q567U6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC93Q567U6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC93Q567U6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CCDC93Q567U6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms