Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 AD000864.1-201ENST00000624076 2295 ntBASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 GPS2P2-201ENST00000430745 888 ntBASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 AL592309.1-201ENST00000443127 649 ntBASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 SPDYE11-202ENST00000450699 704 ntBASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 KLF2P3-201ENST00000451977 1087 ntBASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 SPDYE9P-201ENST00000570642 692 ntBASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 SPDYE10P-202ENST00000612005 668 ntBASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 SPDYE8P-202ENST00000612377 668 ntBASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.18■□□□□ 0.5
CTC1Q2NKJ3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 AC140658.5-201ENST00000438532 169 ntBASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 AC079140.1-201ENST00000508039 487 ntBASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 AC008761.3-201ENST00000624803 892 ntBASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 AC022211.2-201ENST00000585075 2527 ntBASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 AC100803.2-201ENST00000562459 1963 ntBASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.17■□□□□ 0.5
CTC1Q2NKJ3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 AC243562.1-201ENST00000560672 389 ntBASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 LINC02560-201ENST00000596379 459 ntBASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CTC1Q2NKJ3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTC1Q2NKJ3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms