Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL16A1Q07092 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL16A1Q07092 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC22.53■■□□□ 1.2
COL16A1Q07092 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
COL16A1Q07092 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC22.53■■□□□ 1.2
COL16A1Q07092 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL16A1Q07092 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL16A1Q07092 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC22.53■■□□□ 1.2
COL16A1Q07092 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL16A1Q07092 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL16A1Q07092 MPV17-206ENST00000402722 827 ntTSL 3 BASIC22.53■■□□□ 1.2
COL16A1Q07092 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL16A1Q07092 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC22.53■■□□□ 1.2
COL16A1Q07092 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC22.53■■□□□ 1.2
COL16A1Q07092 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC22.53■■□□□ 1.2
COL16A1Q07092 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC22.53■■□□□ 1.2
COL16A1Q07092 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL16A1Q07092 QPRT-203ENST00000562473 579 ntTSL 3 BASIC22.53■■□□□ 1.2
COL16A1Q07092 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC22.53■■□□□ 1.2
COL16A1Q07092 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC22.53■■□□□ 1.2
COL16A1Q07092 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL16A1Q07092 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC22.52■■□□□ 1.2
COL16A1Q07092 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC22.52■■□□□ 1.2
COL16A1Q07092 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC22.52■■□□□ 1.2
COL16A1Q07092 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC22.52■■□□□ 1.2
COL16A1Q07092 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL16A1Q07092 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC22.52■■□□□ 1.2
COL16A1Q07092 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL16A1Q07092 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC22.52■■□□□ 1.2
COL16A1Q07092 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC22.52■■□□□ 1.2
COL16A1Q07092 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.52■■□□□ 1.2
COL16A1Q07092 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC22.52■■□□□ 1.2
COL16A1Q07092 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL16A1Q07092 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL16A1Q07092 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC22.52■■□□□ 1.2
COL16A1Q07092 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
COL16A1Q07092 AC006033.1-201ENST00000440505 426 ntBASIC22.52■■□□□ 1.2
COL16A1Q07092 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
COL16A1Q07092 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC22.52■■□□□ 1.2
COL16A1Q07092 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC22.52■■□□□ 1.2
COL16A1Q07092 PIGL-212ENST00000581006 554 ntTSL 4 BASIC22.52■■□□□ 1.2
COL16A1Q07092 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL16A1Q07092 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL16A1Q07092 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC22.52■■□□□ 1.2
COL16A1Q07092 AL391069.4-201ENST00000609583 481 ntBASIC22.52■■□□□ 1.2
COL16A1Q07092 AC009542.2-202ENST00000619004 1067 ntBASIC22.52■■□□□ 1.2
COL16A1Q07092 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC22.52■■□□□ 1.2
COL16A1Q07092 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC22.52■■□□□ 1.2
COL16A1Q07092 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC22.52■■□□□ 1.2
COL16A1Q07092 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL16A1Q07092 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL16A1Q07092 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
COL16A1Q07092 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC22.52■■□□□ 1.19
COL16A1Q07092 LINC00304-203ENST00000565008 1864 ntBASIC22.52■■□□□ 1.19
COL16A1Q07092 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL16A1Q07092 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL16A1Q07092 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL16A1Q07092 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL16A1Q07092 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL16A1Q07092 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL16A1Q07092 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL16A1Q07092 PFN1P12-201ENST00000455938 534 ntBASIC22.51■■□□□ 1.19
COL16A1Q07092 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC22.51■■□□□ 1.19
COL16A1Q07092 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC22.51■■□□□ 1.19
COL16A1Q07092 APRT-204ENST00000563655 709 ntTSL 5 BASIC22.51■■□□□ 1.19
COL16A1Q07092 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC22.51■■□□□ 1.19
COL16A1Q07092 NAT9-224ENST00000583757 583 ntTSL 3 BASIC22.51■■□□□ 1.19
COL16A1Q07092 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC22.51■■□□□ 1.19
COL16A1Q07092 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL16A1Q07092 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
COL16A1Q07092 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL16A1Q07092 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC22.51■■□□□ 1.19
COL16A1Q07092 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL16A1Q07092 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC22.5■■□□□ 1.19
COL16A1Q07092 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC22.5■■□□□ 1.19
COL16A1Q07092 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC22.5■■□□□ 1.19
COL16A1Q07092 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC22.5■■□□□ 1.19
COL16A1Q07092 SDHAP3-202ENST00000515467 728 ntBASIC22.5■■□□□ 1.19
COL16A1Q07092 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC22.5■■□□□ 1.19
COL16A1Q07092 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC22.5■■□□□ 1.19
COL16A1Q07092 NAA38-207ENST00000576861 556 ntTSL 3 BASIC22.5■■□□□ 1.19
COL16A1Q07092 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC22.5■■□□□ 1.19
COL16A1Q07092 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC22.5■■□□□ 1.19
COL16A1Q07092 LINC01451-201ENST00000623792 534 ntBASIC22.5■■□□□ 1.19
COL16A1Q07092 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL16A1Q07092 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL16A1Q07092 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL16A1Q07092 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL16A1Q07092 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL16A1Q07092 STK4-201ENST00000372801 2038 ntTSL 2 BASIC22.5■■□□□ 1.19
COL16A1Q07092 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL16A1Q07092 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC22.5■■□□□ 1.19
COL16A1Q07092 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL16A1Q07092 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.5■■□□□ 1.19
COL16A1Q07092 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL16A1Q07092 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
COL16A1Q07092 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC22.49■■□□□ 1.19
COL16A1Q07092 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL16A1Q07092 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC22.49■■□□□ 1.19
COL16A1Q07092 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms