Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
H3F3AP84243 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.22■□□□□ 0.03
H3F3AP84243 UNC93B6-202ENST00000528242 690 ntBASIC15.22■□□□□ 0.03
H3F3AP84243 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.22■□□□□ 0.03
H3F3AP84243 AC145285.3-201ENST00000564603 959 ntBASIC15.22■□□□□ 0.03
H3F3AP84243 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.22■□□□□ 0.03
H3F3AP84243 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
H3F3AP84243 BX640515.1-201ENST00000617215 977 ntBASIC15.22■□□□□ 0.03
H3F3AP84243 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.22■□□□□ 0.03
H3F3AP84243 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.22■□□□□ 0.03
H3F3AP84243 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H3F3AP84243 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
H3F3AP84243 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
H3F3AP84243 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
H3F3AP84243 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H3F3AP84243 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.22■□□□□ 0.03
H3F3AP84243 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.22■□□□□ 0.03
H3F3AP84243 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
H3F3AP84243 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.22■□□□□ 0.03
H3F3AP84243 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.22■□□□□ 0.03
H3F3AP84243 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.22■□□□□ 0.03
H3F3AP84243 FER1L4-210ENST00000615531 5998 ntBASIC15.21■□□□□ 0.03
H3F3AP84243 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
H3F3AP84243 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3AP84243 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3AP84243 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3AP84243 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3AP84243 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
H3F3AP84243 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.21■□□□□ 0.03
H3F3AP84243 TUBB8P12-201ENST00000308911 1335 ntBASIC15.21■□□□□ 0.03
H3F3AP84243 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.21■□□□□ 0.03
H3F3AP84243 TUBB7P-202ENST00000428444 1305 ntBASIC15.21■□□□□ 0.03
H3F3AP84243 TUBB8P7-204ENST00000567960 1332 ntBASIC15.21■□□□□ 0.03
H3F3AP84243 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3AP84243 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.21■□□□□ 0.03
H3F3AP84243 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.21■□□□□ 0.03
H3F3AP84243 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3AP84243 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3AP84243 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3AP84243 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3AP84243 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
H3F3AP84243 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
H3F3AP84243 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
H3F3AP84243 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3AP84243 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3AP84243 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.21■□□□□ 0.03
H3F3AP84243 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.21■□□□□ 0.03
H3F3AP84243 PRSS29P-201ENST00000440800 595 ntBASIC15.21■□□□□ 0.03
H3F3AP84243 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.21■□□□□ 0.03
H3F3AP84243 AC009947.1-201ENST00000444350 727 ntBASIC15.21■□□□□ 0.03
H3F3AP84243 AC108073.2-201ENST00000464002 357 ntBASIC15.21■□□□□ 0.03
H3F3AP84243 SLC25A6P2-201ENST00000497974 877 ntBASIC15.21■□□□□ 0.03
H3F3AP84243 RNA5SP415-201ENST00000517246 115 ntBASIC15.21■□□□□ 0.03
H3F3AP84243 OR7E47P-204ENST00000575924 449 ntBASIC15.21■□□□□ 0.03
H3F3AP84243 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3AP84243 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3AP84243 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.21■□□□□ 0.03
H3F3AP84243 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.21■□□□□ 0.03
H3F3AP84243 REXO1L3P-201ENST00000622202 1288 ntBASIC15.21■□□□□ 0.03
H3F3AP84243 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.21■□□□□ 0.03
H3F3AP84243 AC022211.2-201ENST00000585075 2527 ntBASIC15.21■□□□□ 0.03
H3F3AP84243 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3AP84243 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3AP84243 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3AP84243 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3AP84243 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
H3F3AP84243 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
H3F3AP84243 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
H3F3AP84243 AL021920.2-201ENST00000624828 1351 ntBASIC15.21■□□□□ 0.02
H3F3AP84243 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
H3F3AP84243 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.21■□□□□ 0.02
H3F3AP84243 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
H3F3AP84243 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
H3F3AP84243 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
H3F3AP84243 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H3F3AP84243 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.2■□□□□ 0.02
H3F3AP84243 IL9RP2-201ENST00000423948 1312 ntBASIC15.2■□□□□ 0.02
H3F3AP84243 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
H3F3AP84243 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
H3F3AP84243 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
H3F3AP84243 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
H3F3AP84243 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H3F3AP84243 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
H3F3AP84243 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
H3F3AP84243 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
H3F3AP84243 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
H3F3AP84243 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
H3F3AP84243 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H3F3AP84243 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
H3F3AP84243 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.2■□□□□ 0.02
H3F3AP84243 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
H3F3AP84243 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.2■□□□□ 0.02
H3F3AP84243 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.2■□□□□ 0.02
H3F3AP84243 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.2■□□□□ 0.02
H3F3AP84243 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
H3F3AP84243 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H3F3AP84243 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.2■□□□□ 0.02
H3F3AP84243 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.2■□□□□ 0.02
H3F3AP84243 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
H3F3AP84243 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms