Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
CNTNAP1P78357 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP1P78357 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP1P78357 TOP3BP1-201ENST00000420768 1380 ntBASIC20.04■□□□□ 0.8
CNTNAP1P78357 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP1P78357 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP1P78357 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP1P78357 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.04■□□□□ 0.8
CNTNAP1P78357 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CNTNAP1P78357 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP1P78357 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CNTNAP1P78357 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP1P78357 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC20.04■□□□□ 0.8
CNTNAP1P78357 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC20.04■□□□□ 0.8
CNTNAP1P78357 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC20.04■□□□□ 0.8
CNTNAP1P78357 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP1P78357 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC20.04■□□□□ 0.8
CNTNAP1P78357 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP1P78357 AC091167.2-201ENST00000579581 588 ntBASIC20.04■□□□□ 0.8
CNTNAP1P78357 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNTNAP1P78357 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC20.04■□□□□ 0.8
CNTNAP1P78357 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.04■□□□□ 0.8
CNTNAP1P78357 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC20.04■□□□□ 0.8
CNTNAP1P78357 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CNTNAP1P78357 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.04■□□□□ 0.8
CNTNAP1P78357 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.04■□□□□ 0.8
CNTNAP1P78357 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP1P78357 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP1P78357 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP1P78357 AC135050.7-201ENST00000624508 2218 ntBASIC20.03■□□□□ 0.8
CNTNAP1P78357 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC20.03■□□□□ 0.8
CNTNAP1P78357 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP1P78357 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP1P78357 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP1P78357 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP1P78357 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.03■□□□□ 0.8
CNTNAP1P78357 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP1P78357 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP1P78357 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP1P78357 MIR346-201ENST00000362234 95 ntBASIC20.03■□□□□ 0.8
CNTNAP1P78357 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP1P78357 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP1P78357 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20.03■□□□□ 0.8
CNTNAP1P78357 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC20.03■□□□□ 0.8
CNTNAP1P78357 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC20.03■□□□□ 0.8
CNTNAP1P78357 MIR3909-201ENST00000579518 119 ntBASIC20.03■□□□□ 0.8
CNTNAP1P78357 AL512343.1-201ENST00000605837 169 ntBASIC20.03■□□□□ 0.8
CNTNAP1P78357 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.03■□□□□ 0.8
CNTNAP1P78357 AC008267.7-201ENST00000624570 1194 ntBASIC20.03■□□□□ 0.8
CNTNAP1P78357 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.03■□□□□ 0.8
CNTNAP1P78357 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP1P78357 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CNTNAP1P78357 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP1P78357 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.03■□□□□ 0.8
CNTNAP1P78357 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.03■□□□□ 0.8
CNTNAP1P78357 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP1P78357 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNTNAP1P78357 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.02■□□□□ 0.8
CNTNAP1P78357 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.02■□□□□ 0.8
CNTNAP1P78357 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNTNAP1P78357 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNTNAP1P78357 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CNTNAP1P78357 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNTNAP1P78357 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CNTNAP1P78357 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CNTNAP1P78357 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.02■□□□□ 0.8
CNTNAP1P78357 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNTNAP1P78357 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC20.02■□□□□ 0.8
CNTNAP1P78357 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNTNAP1P78357 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.02■□□□□ 0.8
CNTNAP1P78357 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC20.02■□□□□ 0.8
CNTNAP1P78357 AC009407.1-201ENST00000568958 598 ntBASIC20.02■□□□□ 0.8
CNTNAP1P78357 AC027307.2-201ENST00000591252 911 ntBASIC20.02■□□□□ 0.8
CNTNAP1P78357 AC099568.2-201ENST00000609194 695 ntBASIC20.02■□□□□ 0.8
CNTNAP1P78357 GPR182-203ENST00000622922 591 ntBASIC20.02■□□□□ 0.8
CNTNAP1P78357 PFAS-212ENST00000625942 396 ntTSL 5 BASIC20.02■□□□□ 0.8
CNTNAP1P78357 COX11-210ENST00000639671 696 ntBASIC20.02■□□□□ 0.8
CNTNAP1P78357 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CNTNAP1P78357 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CNTNAP1P78357 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.02■□□□□ 0.8
CNTNAP1P78357 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNTNAP1P78357 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CNTNAP1P78357 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CNTNAP1P78357 AC016027.1-202ENST00000607927 1699 ntBASIC20.02■□□□□ 0.8
CNTNAP1P78357 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CNTNAP1P78357 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CNTNAP1P78357 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC20.02■□□□□ 0.79
CNTNAP1P78357 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CNTNAP1P78357 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC20.02■□□□□ 0.79
CNTNAP1P78357 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.02■□□□□ 0.79
CNTNAP1P78357 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.02■□□□□ 0.79
CNTNAP1P78357 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CNTNAP1P78357 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CNTNAP1P78357 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CNTNAP1P78357 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
CNTNAP1P78357 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
CNTNAP1P78357 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNTNAP1P78357 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNTNAP1P78357 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CNTNAP1P78357 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms