Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP46P62068 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP46P62068 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.89■□□□□ 0.45
USP46P62068 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.89■□□□□ 0.45
USP46P62068 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.89■□□□□ 0.45
USP46P62068 REXO1L3P-201ENST00000622202 1288 ntBASIC17.89■□□□□ 0.45
USP46P62068 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP46P62068 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP46P62068 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP46P62068 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.89■□□□□ 0.45
USP46P62068 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP46P62068 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP46P62068 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP46P62068 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP46P62068 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP46P62068 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.88■□□□□ 0.45
USP46P62068 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.88■□□□□ 0.45
USP46P62068 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP46P62068 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
USP46P62068 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.88■□□□□ 0.45
USP46P62068 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.88■□□□□ 0.45
USP46P62068 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.88■□□□□ 0.45
USP46P62068 RPS8P6-201ENST00000426177 609 ntBASIC17.88■□□□□ 0.45
USP46P62068 AL513480.1-201ENST00000451731 511 ntBASIC17.88■□□□□ 0.45
USP46P62068 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.88■□□□□ 0.45
USP46P62068 AC074386.1-202ENST00000463561 864 ntBASIC17.88■□□□□ 0.45
USP46P62068 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.88■□□□□ 0.45
USP46P62068 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.88■□□□□ 0.45
USP46P62068 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
USP46P62068 AC005829.1-201ENST00000570002 483 ntBASIC17.88■□□□□ 0.45
USP46P62068 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
USP46P62068 C20orf181-201ENST00000623918 480 ntBASIC17.88■□□□□ 0.45
USP46P62068 AC007064.4-201ENST00000637740 555 ntBASIC17.88■□□□□ 0.45
USP46P62068 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.88■□□□□ 0.45
USP46P62068 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP46P62068 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.88■□□□□ 0.45
USP46P62068 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP46P62068 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP46P62068 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP46P62068 AC129492.6-201ENST00000611383 1305 ntBASIC17.88■□□□□ 0.45
USP46P62068 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP46P62068 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.88■□□□□ 0.45
USP46P62068 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
USP46P62068 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.88■□□□□ 0.45
USP46P62068 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP46P62068 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP46P62068 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP46P62068 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP46P62068 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.88■□□□□ 0.45
USP46P62068 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP46P62068 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
USP46P62068 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP46P62068 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP46P62068 AC092919.2-201ENST00000623631 1645 ntBASIC17.87■□□□□ 0.45
USP46P62068 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP46P62068 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP46P62068 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP46P62068 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP46P62068 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP46P62068 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.87■□□□□ 0.45
USP46P62068 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.87■□□□□ 0.45
USP46P62068 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP46P62068 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.87■□□□□ 0.45
USP46P62068 HTR5BP-201ENST00000430851 1154 ntBASIC17.87■□□□□ 0.45
USP46P62068 AC004967.1-201ENST00000453589 447 ntBASIC17.87■□□□□ 0.45
USP46P62068 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP46P62068 YBX1P5-201ENST00000509441 847 ntBASIC17.87■□□□□ 0.45
USP46P62068 MIR4469-201ENST00000583919 79 ntBASIC17.87■□□□□ 0.45
USP46P62068 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.87■□□□□ 0.45
USP46P62068 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP46P62068 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP46P62068 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP46P62068 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.87■□□□□ 0.45
USP46P62068 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
USP46P62068 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP46P62068 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP46P62068 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.87■□□□□ 0.45
USP46P62068 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP46P62068 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP46P62068 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
USP46P62068 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP46P62068 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP46P62068 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
USP46P62068 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP46P62068 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP46P62068 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP46P62068 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP46P62068 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.86■□□□□ 0.45
USP46P62068 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP46P62068 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP46P62068 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
USP46P62068 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP46P62068 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USP46P62068 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.86■□□□□ 0.45
USP46P62068 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.86■□□□□ 0.45
USP46P62068 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.86■□□□□ 0.45
USP46P62068 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.86■□□□□ 0.45
USP46P62068 AC092183.1-201ENST00000469884 875 ntBASIC17.86■□□□□ 0.45
USP46P62068 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
USP46P62068 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms