Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.22■□□□□ 0.03
CLDN17P56750 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CLDN17P56750 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN17P56750 AL773604.1-201ENST00000617417 272 ntBASIC15.22■□□□□ 0.03
CLDN17P56750 MIR1199-201ENST00000621445 119 ntBASIC15.22■□□□□ 0.03
CLDN17P56750 AC008735.5-201ENST00000623544 497 ntBASIC15.22■□□□□ 0.03
CLDN17P56750 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN17P56750 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN17P56750 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN17P56750 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN17P56750 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN17P56750 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CLDN17P56750 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN17P56750 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN17P56750 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN17P56750 AD000864.1-201ENST00000624076 2295 ntBASIC15.22■□□□□ 0.03
CLDN17P56750 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN17P56750 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN17P56750 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN17P56750 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CLDN17P56750 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN17P56750 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN17P56750 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CLDN17P56750 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.21■□□□□ 0.03
CLDN17P56750 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CLDN17P56750 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN17P56750 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN17P56750 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.21■□□□□ 0.03
CLDN17P56750 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN17P56750 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN17P56750 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.21■□□□□ 0.03
CLDN17P56750 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CLDN17P56750 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN17P56750 AC105339.3-201ENST00000560043 636 ntBASIC15.21■□□□□ 0.03
CLDN17P56750 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN17P56750 AL121894.2-201ENST00000602977 491 ntBASIC15.21■□□□□ 0.03
CLDN17P56750 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.21■□□□□ 0.03
CLDN17P56750 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
CLDN17P56750 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN17P56750 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.21■□□□□ 0.02
CLDN17P56750 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLDN17P56750 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLDN17P56750 PCDHA12-202ENST00000613593 2588 ntBASIC15.21■□□□□ 0.02
CLDN17P56750 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLDN17P56750 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN17P56750 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN17P56750 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN17P56750 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN17P56750 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN17P56750 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN17P56750 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN17P56750 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN17P56750 PI4KAP1-204ENST00000612579 1703 ntBASIC15.2■□□□□ 0.02
CLDN17P56750 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.2■□□□□ 0.02
CLDN17P56750 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
CLDN17P56750 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CLDN17P56750 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN17P56750 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN17P56750 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN17P56750 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN17P56750 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CLDN17P56750 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN17P56750 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
CLDN17P56750 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN17P56750 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN17P56750 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN17P56750 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN17P56750 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN17P56750 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.2■□□□□ 0.02
CLDN17P56750 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN17P56750 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN17P56750 AP002414.1-201ENST00000391405 1147 ntBASIC15.2■□□□□ 0.02
CLDN17P56750 MRPL3P1-201ENST00000400109 1033 ntBASIC15.2■□□□□ 0.02
CLDN17P56750 AL031284.1-201ENST00000419297 478 ntBASIC15.2■□□□□ 0.02
CLDN17P56750 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN17P56750 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
CLDN17P56750 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.2■□□□□ 0.02
CLDN17P56750 AC136632.2-201ENST00000512891 861 ntBASIC15.2■□□□□ 0.02
CLDN17P56750 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN17P56750 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.2■□□□□ 0.02
CLDN17P56750 AC012640.2-201ENST00000561606 901 ntBASIC15.2■□□□□ 0.02
CLDN17P56750 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN17P56750 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN17P56750 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.2■□□□□ 0.02
CLDN17P56750 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
CLDN17P56750 FAM215A-202ENST00000632077 792 ntBASIC15.2■□□□□ 0.02
CLDN17P56750 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN17P56750 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CLDN17P56750 AC005915.1-201ENST00000624912 2018 ntBASIC15.2■□□□□ 0.02
CLDN17P56750 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CLDN17P56750 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN17P56750 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CLDN17P56750 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN17P56750 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CLDN17P56750 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN17P56750 AP002414.3-201ENST00000589352 1468 ntBASIC15.2■□□□□ 0.02
CLDN17P56750 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN17P56750 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN17P56750 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN17P56750 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms