Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN5P54829 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.57■□□□□ 0.4
PTPN5P54829 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC17.57■□□□□ 0.4
PTPN5P54829 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPN5P54829 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN5P54829 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PTPN5P54829 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.57■□□□□ 0.4
PTPN5P54829 LETM1P2-201ENST00000597330 2178 ntBASIC17.57■□□□□ 0.4
PTPN5P54829 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN5P54829 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPN5P54829 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN5P54829 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN5P54829 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PTPN5P54829 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PTPN5P54829 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN5P54829 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN5P54829 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.57■□□□□ 0.4
PTPN5P54829 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.57■□□□□ 0.4
PTPN5P54829 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PTPN5P54829 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN5P54829 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN5P54829 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN5P54829 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.56■□□□□ 0.4
PTPN5P54829 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PTPN5P54829 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
PTPN5P54829 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN5P54829 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN5P54829 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN5P54829 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN5P54829 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN5P54829 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PTPN5P54829 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN5P54829 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN5P54829 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN5P54829 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN5P54829 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN5P54829 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN5P54829 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.56■□□□□ 0.4
PTPN5P54829 RPS2P32-201ENST00000439199 892 ntBASIC17.56■□□□□ 0.4
PTPN5P54829 AL592309.1-201ENST00000443127 649 ntBASIC17.56■□□□□ 0.4
PTPN5P54829 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.56■□□□□ 0.4
PTPN5P54829 CXCL1P1-201ENST00000502804 216 ntBASIC17.56■□□□□ 0.4
PTPN5P54829 SERBP1P5-201ENST00000510079 1181 ntBASIC17.56■□□□□ 0.4
PTPN5P54829 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.56■□□□□ 0.4
PTPN5P54829 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPN5P54829 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.56■□□□□ 0.4
PTPN5P54829 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.56■□□□□ 0.4
PTPN5P54829 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.56■□□□□ 0.4
PTPN5P54829 AC009118.2-201ENST00000613275 655 ntBASIC17.56■□□□□ 0.4
PTPN5P54829 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPN5P54829 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PTPN5P54829 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN5P54829 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PTPN5P54829 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN5P54829 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PTPN5P54829 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPN5P54829 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
PTPN5P54829 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.56■□□□□ 0.4
PTPN5P54829 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN5P54829 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.56■□□□□ 0.4
PTPN5P54829 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN5P54829 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN5P54829 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN5P54829 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN5P54829 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN5P54829 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN5P54829 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN5P54829 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN5P54829 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.55■□□□□ 0.4
PTPN5P54829 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN5P54829 AL355312.1-201ENST00000407115 2176 ntBASIC17.55■□□□□ 0.4
PTPN5P54829 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
PTPN5P54829 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN5P54829 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN5P54829 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.55■□□□□ 0.4
PTPN5P54829 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN5P54829 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN5P54829 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN5P54829 MTND2P7-201ENST00000521337 640 ntBASIC17.55■□□□□ 0.4
PTPN5P54829 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN5P54829 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.55■□□□□ 0.4
PTPN5P54829 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.55■□□□□ 0.4
PTPN5P54829 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN5P54829 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN5P54829 AC017083.2-201ENST00000608069 979 ntBASIC17.55■□□□□ 0.4
PTPN5P54829 AC019129.2-201ENST00000609837 1235 ntBASIC17.55■□□□□ 0.4
PTPN5P54829 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN5P54829 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN5P54829 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN5P54829 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN5P54829 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN5P54829 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN5P54829 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN5P54829 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN5P54829 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN5P54829 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN5P54829 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN5P54829 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PTPN5P54829 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN5P54829 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms