Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AL009183.1-201ENST00000603760 355 ntBASIC18.04■□□□□ 0.48
BRCC3P46736 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.04■□□□□ 0.48
BRCC3P46736 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.04■□□□□ 0.48
BRCC3P46736 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRCC3P46736 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
BRCC3P46736 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.04■□□□□ 0.48
BRCC3P46736 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
BRCC3P46736 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRCC3P46736 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
BRCC3P46736 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.04■□□□□ 0.48
BRCC3P46736 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BRCC3P46736 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BRCC3P46736 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRCC3P46736 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.03■□□□□ 0.48
BRCC3P46736 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
BRCC3P46736 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRCC3P46736 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.03■□□□□ 0.48
BRCC3P46736 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BRCC3P46736 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BRCC3P46736 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BRCC3P46736 TFAMP1-201ENST00000412727 736 ntBASIC18.03■□□□□ 0.48
BRCC3P46736 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.03■□□□□ 0.48
BRCC3P46736 SPDYE11-202ENST00000450699 704 ntBASIC18.03■□□□□ 0.48
BRCC3P46736 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.03■□□□□ 0.48
BRCC3P46736 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.03■□□□□ 0.48
BRCC3P46736 RFPL4AP1-201ENST00000530883 850 ntBASIC18.03■□□□□ 0.48
BRCC3P46736 SPDYE9P-201ENST00000570642 692 ntBASIC18.03■□□□□ 0.48
BRCC3P46736 SPDYE10P-202ENST00000612005 668 ntBASIC18.03■□□□□ 0.48
BRCC3P46736 SPDYE8P-202ENST00000612377 668 ntBASIC18.03■□□□□ 0.48
BRCC3P46736 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
BRCC3P46736 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.03■□□□□ 0.48
BRCC3P46736 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BRCC3P46736 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRCC3P46736 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRCC3P46736 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
BRCC3P46736 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRCC3P46736 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRCC3P46736 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRCC3P46736 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRCC3P46736 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRCC3P46736 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
BRCC3P46736 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
BRCC3P46736 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.02■□□□□ 0.48
BRCC3P46736 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRCC3P46736 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
BRCC3P46736 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
BRCC3P46736 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
BRCC3P46736 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRCC3P46736 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRCC3P46736 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
BRCC3P46736 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
BRCC3P46736 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.02■□□□□ 0.48
BRCC3P46736 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
BRCC3P46736 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
BRCC3P46736 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.02■□□□□ 0.48
BRCC3P46736 HCG4-201ENST00000418983 998 ntBASIC18.02■□□□□ 0.48
BRCC3P46736 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.02■□□□□ 0.48
BRCC3P46736 AC079140.1-201ENST00000508039 487 ntBASIC18.02■□□□□ 0.48
BRCC3P46736 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.02■□□□□ 0.48
BRCC3P46736 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.02■□□□□ 0.48
BRCC3P46736 AC243562.1-201ENST00000560672 389 ntBASIC18.02■□□□□ 0.48
BRCC3P46736 AL135744.1-201ENST00000565098 629 ntBASIC18.02■□□□□ 0.48
BRCC3P46736 AC091167.2-201ENST00000579581 588 ntBASIC18.02■□□□□ 0.48
BRCC3P46736 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.02■□□□□ 0.48
BRCC3P46736 MPDU1-223ENST00000582151 728 ntBASIC18.02■□□□□ 0.48
BRCC3P46736 KRT8P49-201ENST00000604166 1432 ntBASIC18.02■□□□□ 0.48
BRCC3P46736 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRCC3P46736 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.02■□□□□ 0.48
BRCC3P46736 AC106028.4-201ENST00000614509 607 ntBASIC18.02■□□□□ 0.48
BRCC3P46736 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.02■□□□□ 0.48
BRCC3P46736 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.02■□□□□ 0.48
BRCC3P46736 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.02■□□□□ 0.48
BRCC3P46736 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRCC3P46736 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRCC3P46736 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRCC3P46736 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.47
BRCC3P46736 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BRCC3P46736 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BRCC3P46736 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.02■□□□□ 0.47
BRCC3P46736 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.02■□□□□ 0.47
BRCC3P46736 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
BRCC3P46736 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
BRCC3P46736 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BRCC3P46736 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
BRCC3P46736 LETM1P2-201ENST00000597330 2178 ntBASIC18.01■□□□□ 0.47
BRCC3P46736 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRCC3P46736 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
BRCC3P46736 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRCC3P46736 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRCC3P46736 AC131009.4-201ENST00000624048 1740 ntBASIC18.01■□□□□ 0.47
BRCC3P46736 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRCC3P46736 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
BRCC3P46736 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BRCC3P46736 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
BRCC3P46736 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BRCC3P46736 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRCC3P46736 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
BRCC3P46736 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BRCC3P46736 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRCC3P46736 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms