Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX11P35716 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.72■□□□□ 0.27
SOX11P35716 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX11P35716 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
SOX11P35716 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SOX11P35716 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX11P35716 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SOX11P35716 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX11P35716 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SOX11P35716 AC106795.1-205ENST00000512851 1056 ntBASIC16.72■□□□□ 0.27
SOX11P35716 AP002469.2-201ENST00000531724 424 ntBASIC16.72■□□□□ 0.27
SOX11P35716 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.72■□□□□ 0.27
SOX11P35716 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX11P35716 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX11P35716 AC116407.2-201ENST00000613639 860 ntBASIC16.72■□□□□ 0.27
SOX11P35716 REXO1L6P-202ENST00000619970 1078 ntBASIC16.72■□□□□ 0.27
SOX11P35716 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX11P35716 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX11P35716 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.72■□□□□ 0.27
SOX11P35716 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.72■□□□□ 0.27
SOX11P35716 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX11P35716 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX11P35716 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX11P35716 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX11P35716 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.72■□□□□ 0.27
SOX11P35716 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX11P35716 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SOX11P35716 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX11P35716 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX11P35716 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX11P35716 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX11P35716 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
SOX11P35716 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SOX11P35716 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.72■□□□□ 0.27
SOX11P35716 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX11P35716 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SOX11P35716 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.71■□□□□ 0.27
SOX11P35716 TSPY26P-202ENST00000565928 3884 ntBASIC16.71■□□□□ 0.27
SOX11P35716 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SOX11P35716 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SOX11P35716 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SOX11P35716 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SOX11P35716 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SOX11P35716 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SOX11P35716 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SOX11P35716 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.71■□□□□ 0.27
SOX11P35716 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SOX11P35716 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.71■□□□□ 0.27
SOX11P35716 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.71■□□□□ 0.27
SOX11P35716 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.71■□□□□ 0.27
SOX11P35716 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.71■□□□□ 0.27
SOX11P35716 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.71■□□□□ 0.27
SOX11P35716 SAPCD2P3-201ENST00000455031 850 ntBASIC16.71■□□□□ 0.27
SOX11P35716 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.71■□□□□ 0.27
SOX11P35716 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SOX11P35716 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.71■□□□□ 0.27
SOX11P35716 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.71■□□□□ 0.27
SOX11P35716 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.71■□□□□ 0.27
SOX11P35716 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SOX11P35716 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SOX11P35716 KRT8P47-201ENST00000604727 1398 ntBASIC16.71■□□□□ 0.27
SOX11P35716 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
SOX11P35716 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.71■□□□□ 0.27
SOX11P35716 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.71■□□□□ 0.27
SOX11P35716 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
SOX11P35716 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SOX11P35716 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.71■□□□□ 0.27
SOX11P35716 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SOX11P35716 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SOX11P35716 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
SOX11P35716 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SOX11P35716 AC046158.3-201ENST00000624947 2558 ntBASIC16.71■□□□□ 0.26
SOX11P35716 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.71■□□□□ 0.26
SOX11P35716 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SOX11P35716 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SOX11P35716 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
SOX11P35716 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
SOX11P35716 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SOX11P35716 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.7■□□□□ 0.26
SOX11P35716 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SOX11P35716 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX11P35716 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.7■□□□□ 0.26
SOX11P35716 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.7■□□□□ 0.26
SOX11P35716 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.7■□□□□ 0.26
SOX11P35716 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.7■□□□□ 0.26
SOX11P35716 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX11P35716 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SOX11P35716 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
SOX11P35716 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SOX11P35716 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX11P35716 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX11P35716 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX11P35716 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX11P35716 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX11P35716 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SOX11P35716 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SOX11P35716 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SOX11P35716 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX11P35716 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.7■□□□□ 0.26
SOX11P35716 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms