Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LCN1P31025 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.8■□□□□ 0.12
LCN1P31025 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.8■□□□□ 0.12
LCN1P31025 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LCN1P31025 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.8■□□□□ 0.12
LCN1P31025 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.8■□□□□ 0.12
LCN1P31025 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
LCN1P31025 AL391005.1-201ENST00000623953 2435 ntBASIC15.8■□□□□ 0.12
LCN1P31025 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.8■□□□□ 0.12
LCN1P31025 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LCN1P31025 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LCN1P31025 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LCN1P31025 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LCN1P31025 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LCN1P31025 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.8■□□□□ 0.12
LCN1P31025 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.8■□□□□ 0.12
LCN1P31025 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.8■□□□□ 0.12
LCN1P31025 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LCN1P31025 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LCN1P31025 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LCN1P31025 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LCN1P31025 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCN1P31025 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCN1P31025 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCN1P31025 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LCN1P31025 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
LCN1P31025 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCN1P31025 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCN1P31025 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.79■□□□□ 0.12
LCN1P31025 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCN1P31025 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCN1P31025 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
LCN1P31025 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LCN1P31025 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LCN1P31025 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LCN1P31025 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.79■□□□□ 0.12
LCN1P31025 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.79■□□□□ 0.12
LCN1P31025 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.79■□□□□ 0.12
LCN1P31025 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.79■□□□□ 0.12
LCN1P31025 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LCN1P31025 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
LCN1P31025 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LCN1P31025 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.79■□□□□ 0.12
LCN1P31025 AF228730.7-201ENST00000641842 219 ntBASIC15.79■□□□□ 0.12
LCN1P31025 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCN1P31025 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCN1P31025 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCN1P31025 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.79■□□□□ 0.12
LCN1P31025 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LCN1P31025 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCN1P31025 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LCN1P31025 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCN1P31025 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LCN1P31025 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCN1P31025 FRMD8P1-201ENST00000440433 1524 ntBASIC15.78■□□□□ 0.12
LCN1P31025 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCN1P31025 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCN1P31025 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCN1P31025 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCN1P31025 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.78■□□□□ 0.12
LCN1P31025 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LCN1P31025 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.78■□□□□ 0.12
LCN1P31025 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LCN1P31025 TUBB8P12-201ENST00000308911 1335 ntBASIC15.78■□□□□ 0.12
LCN1P31025 TUBB7P-202ENST00000428444 1305 ntBASIC15.78■□□□□ 0.12
LCN1P31025 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LCN1P31025 TUBB8P7-204ENST00000567960 1332 ntBASIC15.78■□□□□ 0.12
LCN1P31025 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
LCN1P31025 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCN1P31025 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
LCN1P31025 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.78■□□□□ 0.12
LCN1P31025 EMBP1-201ENST00000458200 901 ntBASIC15.78■□□□□ 0.12
LCN1P31025 AF186996.4-201ENST00000467186 377 ntBASIC15.78■□□□□ 0.12
LCN1P31025 AP002490.2-201ENST00000524791 560 ntBASIC15.78■□□□□ 0.12
LCN1P31025 RN7SL510P-201ENST00000581311 263 ntBASIC15.78■□□□□ 0.12
LCN1P31025 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.78■□□□□ 0.12
LCN1P31025 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.78■□□□□ 0.12
LCN1P31025 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.78■□□□□ 0.12
LCN1P31025 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LCN1P31025 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LCN1P31025 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.78■□□□□ 0.12
LCN1P31025 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LCN1P31025 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCN1P31025 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCN1P31025 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCN1P31025 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LCN1P31025 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCN1P31025 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCN1P31025 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCN1P31025 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCN1P31025 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LCN1P31025 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LCN1P31025 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LCN1P31025 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
LCN1P31025 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LCN1P31025 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LCN1P31025 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LCN1P31025 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.77■□□□□ 0.12
LCN1P31025 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LCN1P31025 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms