Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TM4SF1P30408 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.92■□□□□ 0.94
TM4SF1P30408 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.92■□□□□ 0.94
TM4SF1P30408 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF1P30408 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF1P30408 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF1P30408 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.92■□□□□ 0.94
TM4SF1P30408 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.92■□□□□ 0.94
TM4SF1P30408 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TM4SF1P30408 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF1P30408 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.92■□□□□ 0.94
TM4SF1P30408 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF1P30408 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TM4SF1P30408 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TM4SF1P30408 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TM4SF1P30408 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TM4SF1P30408 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TM4SF1P30408 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC20.91■□□□□ 0.94
TM4SF1P30408 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TM4SF1P30408 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.91■□□□□ 0.94
TM4SF1P30408 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TM4SF1P30408 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TM4SF1P30408 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
TM4SF1P30408 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TM4SF1P30408 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TM4SF1P30408 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.91■□□□□ 0.94
TM4SF1P30408 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TM4SF1P30408 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.91■□□□□ 0.94
TM4SF1P30408 INE1-201ENST00000456273 945 ntBASIC20.91■□□□□ 0.94
TM4SF1P30408 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TM4SF1P30408 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC20.91■□□□□ 0.94
TM4SF1P30408 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC20.91■□□□□ 0.94
TM4SF1P30408 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
TM4SF1P30408 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TM4SF1P30408 SPTSSB-204ENST00000617024 1292 ntBASIC20.91■□□□□ 0.94
TM4SF1P30408 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.91■□□□□ 0.94
TM4SF1P30408 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TM4SF1P30408 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.91■□□□□ 0.94
TM4SF1P30408 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.9■□□□□ 0.94
TM4SF1P30408 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TM4SF1P30408 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF1P30408 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF1P30408 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.9■□□□□ 0.94
TM4SF1P30408 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF1P30408 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.9■□□□□ 0.94
TM4SF1P30408 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.9■□□□□ 0.94
TM4SF1P30408 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF1P30408 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF1P30408 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
TM4SF1P30408 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF1P30408 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
TM4SF1P30408 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TM4SF1P30408 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF1P30408 AL353705.2-201ENST00000428243 662 ntBASIC20.9■□□□□ 0.94
TM4SF1P30408 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.9■□□□□ 0.94
TM4SF1P30408 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC20.9■□□□□ 0.94
TM4SF1P30408 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF1P30408 AC004790.1-201ENST00000612686 536 ntBASIC20.9■□□□□ 0.94
TM4SF1P30408 AL162274.1-201ENST00000617191 1098 ntBASIC20.9■□□□□ 0.94
TM4SF1P30408 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC20.9■□□□□ 0.94
TM4SF1P30408 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF1P30408 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF1P30408 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.9■□□□□ 0.94
TM4SF1P30408 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF1P30408 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
TM4SF1P30408 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF1P30408 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF1P30408 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TM4SF1P30408 FRMD8P1-201ENST00000440433 1524 ntBASIC20.89■□□□□ 0.94
TM4SF1P30408 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TM4SF1P30408 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
TM4SF1P30408 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
TM4SF1P30408 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.89■□□□□ 0.94
TM4SF1P30408 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TM4SF1P30408 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TM4SF1P30408 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TM4SF1P30408 CENPM-206ENST00000407253 818 ntTSL 2 BASIC20.89■□□□□ 0.93
TM4SF1P30408 DFFBP1-201ENST00000433250 979 ntBASIC20.89■□□□□ 0.93
TM4SF1P30408 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TM4SF1P30408 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TM4SF1P30408 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TM4SF1P30408 MTND6P24-201ENST00000440466 518 ntBASIC20.89■□□□□ 0.93
TM4SF1P30408 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TM4SF1P30408 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.89■□□□□ 0.93
TM4SF1P30408 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC20.89■□□□□ 0.93
TM4SF1P30408 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TM4SF1P30408 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.89■□□□□ 0.93
TM4SF1P30408 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TM4SF1P30408 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC20.89■□□□□ 0.93
TM4SF1P30408 AC105021.1-202ENST00000570572 669 ntBASIC20.89■□□□□ 0.93
TM4SF1P30408 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.89■□□□□ 0.93
TM4SF1P30408 CHCHD2P3-201ENST00000603038 451 ntBASIC20.89■□□□□ 0.93
TM4SF1P30408 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TM4SF1P30408 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TM4SF1P30408 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TM4SF1P30408 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TM4SF1P30408 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TM4SF1P30408 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TM4SF1P30408 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
TM4SF1P30408 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms