Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.68■□□□□ 0.1
ABCD3P28288 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.68■□□□□ 0.1
ABCD3P28288 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.68■□□□□ 0.1
ABCD3P28288 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
ABCD3P28288 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
ABCD3P28288 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.68■□□□□ 0.1
ABCD3P28288 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.68■□□□□ 0.1
ABCD3P28288 AP000347.1-202ENST00000435868 847 ntBASIC15.68■□□□□ 0.1
ABCD3P28288 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ABCD3P28288 DUX4L17-201ENST00000557360 1267 ntBASIC15.68■□□□□ 0.1
ABCD3P28288 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.68■□□□□ 0.1
ABCD3P28288 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ABCD3P28288 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.68■□□□□ 0.1
ABCD3P28288 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ABCD3P28288 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ABCD3P28288 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ABCD3P28288 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ABCD3P28288 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.68■□□□□ 0.1
ABCD3P28288 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ABCD3P28288 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.68■□□□□ 0.1
ABCD3P28288 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ABCD3P28288 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ABCD3P28288 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ABCD3P28288 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.68■□□□□ 0.1
ABCD3P28288 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ABCD3P28288 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ABCD3P28288 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ABCD3P28288 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ABCD3P28288 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ABCD3P28288 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ABCD3P28288 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ABCD3P28288 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.67■□□□□ 0.1
ABCD3P28288 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ABCD3P28288 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.67■□□□□ 0.1
ABCD3P28288 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
ABCD3P28288 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ABCD3P28288 AL021920.2-201ENST00000624828 1351 ntBASIC15.67■□□□□ 0.1
ABCD3P28288 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
ABCD3P28288 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ABCD3P28288 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ABCD3P28288 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ABCD3P28288 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.67■□□□□ 0.1
ABCD3P28288 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ABCD3P28288 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
ABCD3P28288 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ABCD3P28288 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ABCD3P28288 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.67■□□□□ 0.1
ABCD3P28288 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.67■□□□□ 0.1
ABCD3P28288 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.67■□□□□ 0.1
ABCD3P28288 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.67■□□□□ 0.1
ABCD3P28288 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ABCD3P28288 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ABCD3P28288 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.67■□□□□ 0.1
ABCD3P28288 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
ABCD3P28288 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ABCD3P28288 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ABCD3P28288 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.67■□□□□ 0.1
ABCD3P28288 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ABCD3P28288 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.67■□□□□ 0.1
ABCD3P28288 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ABCD3P28288 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ABCD3P28288 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ABCD3P28288 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.67■□□□□ 0.1
ABCD3P28288 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.67■□□□□ 0.1
ABCD3P28288 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
ABCD3P28288 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ABCD3P28288 AC129492.6-201ENST00000611383 1305 ntBASIC15.67■□□□□ 0.1
ABCD3P28288 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ABCD3P28288 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ABCD3P28288 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ABCD3P28288 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ABCD3P28288 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ABCD3P28288 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.66■□□□□ 0.1
ABCD3P28288 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ABCD3P28288 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ABCD3P28288 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.66■□□□□ 0.1
ABCD3P28288 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ABCD3P28288 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ABCD3P28288 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ABCD3P28288 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ABCD3P28288 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ABCD3P28288 AC007967.2-201ENST00000432613 625 ntBASIC15.66■□□□□ 0.1
ABCD3P28288 AL591424.1-201ENST00000442569 1213 ntBASIC15.66■□□□□ 0.1
ABCD3P28288 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.66■□□□□ 0.1
ABCD3P28288 HCG4B-203ENST00000450128 991 ntBASIC15.66■□□□□ 0.1
ABCD3P28288 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
ABCD3P28288 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.66■□□□□ 0.1
ABCD3P28288 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.66■□□□□ 0.1
ABCD3P28288 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ABCD3P28288 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.66■□□□□ 0.1
ABCD3P28288 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.66■□□□□ 0.1
ABCD3P28288 AC027601.4-201ENST00000611259 610 ntBASIC15.66■□□□□ 0.1
ABCD3P28288 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ABCD3P28288 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ABCD3P28288 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.66■□□□□ 0.1
ABCD3P28288 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ABCD3P28288 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ABCD3P28288 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.66■□□□□ 0.1
ABCD3P28288 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.66■□□□□ 0.1
ABCD3P28288 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms