Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2B1P20020 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.65■□□□□ 0.74
ATP2B1P20020 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ATP2B1P20020 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.65■□□□□ 0.74
ATP2B1P20020 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.65■□□□□ 0.74
ATP2B1P20020 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2B1P20020 MTDHP4-201ENST00000600287 670 ntBASIC19.65■□□□□ 0.74
ATP2B1P20020 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.65■□□□□ 0.74
ATP2B1P20020 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.65■□□□□ 0.74
ATP2B1P20020 AL691432.3-201ENST00000621860 400 ntBASIC19.65■□□□□ 0.74
ATP2B1P20020 AL139288.1-201ENST00000623748 933 ntBASIC19.65■□□□□ 0.74
ATP2B1P20020 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2B1P20020 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2B1P20020 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2B1P20020 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2B1P20020 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ATP2B1P20020 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.65■□□□□ 0.74
ATP2B1P20020 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2B1P20020 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2B1P20020 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
ATP2B1P20020 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2B1P20020 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ATP2B1P20020 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
ATP2B1P20020 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ATP2B1P20020 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
ATP2B1P20020 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ATP2B1P20020 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.64■□□□□ 0.74
ATP2B1P20020 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.74
ATP2B1P20020 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ATP2B1P20020 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
ATP2B1P20020 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2B1P20020 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2B1P20020 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2B1P20020 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2B1P20020 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2B1P20020 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2B1P20020 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2B1P20020 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.64■□□□□ 0.73
ATP2B1P20020 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.64■□□□□ 0.73
ATP2B1P20020 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.64■□□□□ 0.73
ATP2B1P20020 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.64■□□□□ 0.73
ATP2B1P20020 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.64■□□□□ 0.73
ATP2B1P20020 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.64■□□□□ 0.73
ATP2B1P20020 RN7SL510P-201ENST00000581311 263 ntBASIC19.64■□□□□ 0.73
ATP2B1P20020 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.64■□□□□ 0.73
ATP2B1P20020 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ATP2B1P20020 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.64■□□□□ 0.73
ATP2B1P20020 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.64■□□□□ 0.73
ATP2B1P20020 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2B1P20020 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2B1P20020 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2B1P20020 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2B1P20020 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
ATP2B1P20020 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2B1P20020 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2B1P20020 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2B1P20020 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2B1P20020 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2B1P20020 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2B1P20020 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2B1P20020 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2B1P20020 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC19.63■□□□□ 0.73
ATP2B1P20020 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.63■□□□□ 0.73
ATP2B1P20020 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.63■□□□□ 0.73
ATP2B1P20020 GPR89P-201ENST00000407924 1495 ntBASIC19.63■□□□□ 0.73
ATP2B1P20020 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ATP2B1P20020 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2B1P20020 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2B1P20020 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2B1P20020 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
ATP2B1P20020 ACTG1P4-201ENST00000425123 1122 ntBASIC19.63■□□□□ 0.73
ATP2B1P20020 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ATP2B1P20020 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.63■□□□□ 0.73
ATP2B1P20020 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.63■□□□□ 0.73
ATP2B1P20020 AC021087.4-201ENST00000563761 564 ntBASIC19.63■□□□□ 0.73
ATP2B1P20020 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.63■□□□□ 0.73
ATP2B1P20020 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.63■□□□□ 0.73
ATP2B1P20020 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2B1P20020 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.63■□□□□ 0.73
ATP2B1P20020 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2B1P20020 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2B1P20020 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.63■□□□□ 0.73
ATP2B1P20020 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ATP2B1P20020 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2B1P20020 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.63■□□□□ 0.73
ATP2B1P20020 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC19.63■□□□□ 0.73
ATP2B1P20020 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2B1P20020 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2B1P20020 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2B1P20020 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2B1P20020 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ATP2B1P20020 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.62■□□□□ 0.73
ATP2B1P20020 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ATP2B1P20020 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATP2B1P20020 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
ATP2B1P20020 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.62■□□□□ 0.73
ATP2B1P20020 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP2B1P20020 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP2B1P20020 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP2B1P20020 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms