Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN1P18031 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN1P18031 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PTPN1P18031 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.99■□□□□ 0.47
PTPN1P18031 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN1P18031 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN1P18031 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN1P18031 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN1P18031 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.99■□□□□ 0.47
PTPN1P18031 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PTPN1P18031 KRT8P49-201ENST00000604166 1432 ntBASIC17.98■□□□□ 0.47
PTPN1P18031 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.98■□□□□ 0.47
PTPN1P18031 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN1P18031 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN1P18031 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN1P18031 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN1P18031 AC092068.3-201ENST00000587894 2016 ntBASIC17.98■□□□□ 0.47
PTPN1P18031 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN1P18031 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.98■□□□□ 0.47
PTPN1P18031 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN1P18031 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN1P18031 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.98■□□□□ 0.47
PTPN1P18031 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN1P18031 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN1P18031 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.98■□□□□ 0.47
PTPN1P18031 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN1P18031 AC074386.1-202ENST00000463561 864 ntBASIC17.98■□□□□ 0.47
PTPN1P18031 AC005412.3-201ENST00000580309 715 ntBASIC17.98■□□□□ 0.47
PTPN1P18031 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.98■□□□□ 0.47
PTPN1P18031 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.98■□□□□ 0.47
PTPN1P18031 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PTPN1P18031 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN1P18031 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.98■□□□□ 0.47
PTPN1P18031 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.98■□□□□ 0.47
PTPN1P18031 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PTPN1P18031 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN1P18031 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN1P18031 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
PTPN1P18031 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN1P18031 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.98■□□□□ 0.47
PTPN1P18031 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN1P18031 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.98■□□□□ 0.47
PTPN1P18031 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN1P18031 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN1P18031 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN1P18031 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN1P18031 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN1P18031 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.97■□□□□ 0.47
PTPN1P18031 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN1P18031 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN1P18031 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN1P18031 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.97■□□□□ 0.47
PTPN1P18031 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PTPN1P18031 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PTPN1P18031 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN1P18031 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN1P18031 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN1P18031 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN1P18031 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN1P18031 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN1P18031 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN1P18031 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN1P18031 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.97■□□□□ 0.47
PTPN1P18031 DNAJB3-201ENST00000446806 729 ntBASIC17.97■□□□□ 0.47
PTPN1P18031 AC112482.1-201ENST00000492080 688 ntBASIC17.97■□□□□ 0.47
PTPN1P18031 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN1P18031 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.97■□□□□ 0.47
PTPN1P18031 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.97■□□□□ 0.47
PTPN1P18031 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.97■□□□□ 0.47
PTPN1P18031 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PTPN1P18031 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.97■□□□□ 0.47
PTPN1P18031 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN1P18031 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN1P18031 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PTPN1P18031 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN1P18031 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN1P18031 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.97■□□□□ 0.47
PTPN1P18031 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.97■□□□□ 0.47
PTPN1P18031 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.97■□□□□ 0.47
PTPN1P18031 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN1P18031 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN1P18031 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN1P18031 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN1P18031 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
PTPN1P18031 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.96■□□□□ 0.47
PTPN1P18031 AL353732.1-201ENST00000569618 1459 ntBASIC17.96■□□□□ 0.47
PTPN1P18031 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN1P18031 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PTPN1P18031 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN1P18031 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.96■□□□□ 0.47
PTPN1P18031 UPF3AP3-201ENST00000420996 769 ntBASIC17.96■□□□□ 0.47
PTPN1P18031 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
PTPN1P18031 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.96■□□□□ 0.47
PTPN1P18031 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.96■□□□□ 0.47
PTPN1P18031 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.96■□□□□ 0.47
PTPN1P18031 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.96■□□□□ 0.47
PTPN1P18031 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.96■□□□□ 0.47
PTPN1P18031 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.96■□□□□ 0.47
PTPN1P18031 MIR4515-201ENST00000584082 81 ntBASIC17.96■□□□□ 0.47
PTPN1P18031 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms