Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC20.3■□□□□ 0.84
COL1A1P02452 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A1P02452 AC002472.2-201ENST00000442739 958 ntBASIC20.3■□□□□ 0.84
COL1A1P02452 INGX-202ENST00000489074 768 ntBASIC20.3■□□□□ 0.84
COL1A1P02452 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.3■□□□□ 0.84
COL1A1P02452 AC140878.1-201ENST00000565277 250 ntBASIC20.3■□□□□ 0.84
COL1A1P02452 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A1P02452 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.3■□□□□ 0.84
COL1A1P02452 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A1P02452 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.3■□□□□ 0.84
COL1A1P02452 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A1P02452 TUBB3P1-201ENST00000405796 1332 ntBASIC20.3■□□□□ 0.84
COL1A1P02452 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A1P02452 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A1P02452 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A1P02452 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A1P02452 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A1P02452 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.3■□□□□ 0.84
COL1A1P02452 AL671710.1-201ENST00000610245 2349 ntBASIC20.3■□□□□ 0.84
COL1A1P02452 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A1P02452 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.3■□□□□ 0.84
COL1A1P02452 FOXO1B-201ENST00000504678 1527 ntBASIC20.3■□□□□ 0.84
COL1A1P02452 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A1P02452 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
COL1A1P02452 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A1P02452 RNF165-205ENST00000588679 2904 ntBASIC20.3■□□□□ 0.84
COL1A1P02452 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A1P02452 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A1P02452 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A1P02452 BAD-202ENST00000394531 631 ntTSL 3 BASIC20.3■□□□□ 0.84
COL1A1P02452 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A1P02452 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.3■□□□□ 0.84
COL1A1P02452 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC20.3■□□□□ 0.84
COL1A1P02452 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC20.3■□□□□ 0.84
COL1A1P02452 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A1P02452 CCDC74BP1-201ENST00000508880 1123 ntBASIC20.3■□□□□ 0.84
COL1A1P02452 BAD-207ENST00000544785 525 ntTSL 3 BASIC20.3■□□□□ 0.84
COL1A1P02452 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.3■□□□□ 0.84
COL1A1P02452 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.3■□□□□ 0.84
COL1A1P02452 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A1P02452 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A1P02452 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.3■□□□□ 0.84
COL1A1P02452 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A1P02452 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.3■□□□□ 0.84
COL1A1P02452 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A1P02452 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A1P02452 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
COL1A1P02452 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.29■□□□□ 0.84
COL1A1P02452 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
COL1A1P02452 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL1A1P02452 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL1A1P02452 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL1A1P02452 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL1A1P02452 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
COL1A1P02452 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL1A1P02452 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC20.29■□□□□ 0.84
COL1A1P02452 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.29■□□□□ 0.84
COL1A1P02452 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL1A1P02452 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.29■□□□□ 0.84
COL1A1P02452 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL1A1P02452 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL1A1P02452 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC20.29■□□□□ 0.84
COL1A1P02452 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.29■□□□□ 0.84
COL1A1P02452 AC236430.1-201ENST00000402231 743 ntBASIC20.29■□□□□ 0.84
COL1A1P02452 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC20.29■□□□□ 0.84
COL1A1P02452 AC015922.1-201ENST00000421102 1152 ntBASIC20.29■□□□□ 0.84
COL1A1P02452 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
COL1A1P02452 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.29■□□□□ 0.84
COL1A1P02452 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC20.29■□□□□ 0.84
COL1A1P02452 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL1A1P02452 AP000842.3-202ENST00000569238 1080 ntBASIC20.29■□□□□ 0.84
COL1A1P02452 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC20.29■□□□□ 0.84
COL1A1P02452 AL158211.3-201ENST00000607385 239 ntBASIC20.29■□□□□ 0.84
COL1A1P02452 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL1A1P02452 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL1A1P02452 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
COL1A1P02452 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL1A1P02452 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
COL1A1P02452 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.29■□□□□ 0.84
COL1A1P02452 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.29■□□□□ 0.84
COL1A1P02452 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
COL1A1P02452 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL1A1P02452 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
COL1A1P02452 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL1A1P02452 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL1A1P02452 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.28■□□□□ 0.84
COL1A1P02452 AL645608.8-201ENST00000606034 2086 ntBASIC20.28■□□□□ 0.84
COL1A1P02452 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL1A1P02452 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.28■□□□□ 0.84
COL1A1P02452 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL1A1P02452 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.28■□□□□ 0.84
COL1A1P02452 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL1A1P02452 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL1A1P02452 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL1A1P02452 AC142381.1-201ENST00000426099 345 ntBASIC20.28■□□□□ 0.84
COL1A1P02452 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL1A1P02452 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC20.28■□□□□ 0.84
COL1A1P02452 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL1A1P02452 SLC25A39P2-201ENST00000537614 270 ntBASIC20.28■□□□□ 0.84
COL1A1P02452 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms