Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AL080243.2-201ENST00000418783 582 ntBASIC18.19■□□□□ 0.5
TIMP1P01033 AC245100.3-201ENST00000441281 285 ntBASIC18.19■□□□□ 0.5
TIMP1P01033 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.19■□□□□ 0.5
TIMP1P01033 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP1P01033 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.19■□□□□ 0.5
TIMP1P01033 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.19■□□□□ 0.5
TIMP1P01033 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP1P01033 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TIMP1P01033 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.19■□□□□ 0.5
TIMP1P01033 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.19■□□□□ 0.5
TIMP1P01033 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.19■□□□□ 0.5
TIMP1P01033 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.19■□□□□ 0.5
TIMP1P01033 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.19■□□□□ 0.5
TIMP1P01033 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
TIMP1P01033 KRT8P49-201ENST00000604166 1432 ntBASIC18.19■□□□□ 0.5
TIMP1P01033 AL606495.2-201ENST00000605867 535 ntBASIC18.19■□□□□ 0.5
TIMP1P01033 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TIMP1P01033 AP000974.1-201ENST00000623909 2387 ntBASIC18.19■□□□□ 0.5
TIMP1P01033 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP1P01033 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TIMP1P01033 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP1P01033 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP1P01033 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.19■□□□□ 0.5
TIMP1P01033 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.19■□□□□ 0.5
TIMP1P01033 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIMP1P01033 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.19■□□□□ 0.5
TIMP1P01033 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP1P01033 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.18■□□□□ 0.5
TIMP1P01033 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TIMP1P01033 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP1P01033 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.18■□□□□ 0.5
TIMP1P01033 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP1P01033 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP1P01033 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TIMP1P01033 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP1P01033 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP1P01033 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP1P01033 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TIMP1P01033 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP1P01033 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TIMP1P01033 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.18■□□□□ 0.5
TIMP1P01033 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.18■□□□□ 0.5
TIMP1P01033 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TIMP1P01033 AC022210.1-201ENST00000449856 793 ntBASIC18.18■□□□□ 0.5
TIMP1P01033 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.18■□□□□ 0.5
TIMP1P01033 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.18■□□□□ 0.5
TIMP1P01033 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TIMP1P01033 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TIMP1P01033 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TIMP1P01033 WASH4P-201ENST00000564273 1246 ntBASIC18.18■□□□□ 0.5
TIMP1P01033 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.18■□□□□ 0.5
TIMP1P01033 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP1P01033 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TIMP1P01033 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.18■□□□□ 0.5
TIMP1P01033 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP1P01033 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP1P01033 AL023806.1-201ENST00000603994 1649 ntBASIC18.18■□□□□ 0.5
TIMP1P01033 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP1P01033 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
TIMP1P01033 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP1P01033 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP1P01033 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP1P01033 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIMP1P01033 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.17■□□□□ 0.5
TIMP1P01033 AC090164.3-201ENST00000610780 2143 ntBASIC18.17■□□□□ 0.5
TIMP1P01033 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP1P01033 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.17■□□□□ 0.5
TIMP1P01033 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.17■□□□□ 0.5
TIMP1P01033 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP1P01033 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP1P01033 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP1P01033 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP1P01033 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.17■□□□□ 0.5
TIMP1P01033 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP1P01033 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.17■□□□□ 0.5
TIMP1P01033 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP1P01033 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.17■□□□□ 0.5
TIMP1P01033 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.17■□□□□ 0.5
TIMP1P01033 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP1P01033 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP1P01033 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP1P01033 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.17■□□□□ 0.5
TIMP1P01033 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.17■□□□□ 0.5
TIMP1P01033 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.17■□□□□ 0.5
TIMP1P01033 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.17■□□□□ 0.5
TIMP1P01033 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TIMP1P01033 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.17■□□□□ 0.5
TIMP1P01033 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP1P01033 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP1P01033 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TIMP1P01033 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.17■□□□□ 0.5
TIMP1P01033 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TIMP1P01033 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP1P01033 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP1P01033 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TIMP1P01033 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP1P01033 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.17■□□□□ 0.5
TIMP1P01033 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP1P01033 AL021920.2-201ENST00000624828 1351 ntBASIC18.17■□□□□ 0.5
TIMP1P01033 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms