Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CBX6O95503 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.04■□□□□ 0.32
CBX6O95503 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX6O95503 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.04■□□□□ 0.32
CBX6O95503 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX6O95503 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CBX6O95503 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX6O95503 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CBX6O95503 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX6O95503 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX6O95503 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
CBX6O95503 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX6O95503 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.04■□□□□ 0.32
CBX6O95503 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX6O95503 SLC25A1P3-201ENST00000395415 828 ntBASIC17.04■□□□□ 0.32
CBX6O95503 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CBX6O95503 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.04■□□□□ 0.32
CBX6O95503 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CBX6O95503 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.04■□□□□ 0.32
CBX6O95503 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.04■□□□□ 0.32
CBX6O95503 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.04■□□□□ 0.32
CBX6O95503 MIR3180-4-201ENST00000582223 153 ntBASIC17.04■□□□□ 0.32
CBX6O95503 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
CBX6O95503 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX6O95503 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CBX6O95503 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX6O95503 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CBX6O95503 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX6O95503 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX6O95503 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX6O95503 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CBX6O95503 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.04■□□□□ 0.32
CBX6O95503 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX6O95503 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX6O95503 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX6O95503 KRT8P47-201ENST00000604727 1398 ntBASIC17.03■□□□□ 0.32
CBX6O95503 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CBX6O95503 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
CBX6O95503 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX6O95503 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX6O95503 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CBX6O95503 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.03■□□□□ 0.32
CBX6O95503 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX6O95503 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX6O95503 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.03■□□□□ 0.32
CBX6O95503 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX6O95503 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX6O95503 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX6O95503 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.03■□□□□ 0.32
CBX6O95503 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.03■□□□□ 0.32
CBX6O95503 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.03■□□□□ 0.32
CBX6O95503 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.03■□□□□ 0.32
CBX6O95503 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.03■□□□□ 0.32
CBX6O95503 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.03■□□□□ 0.32
CBX6O95503 AP002414.4-201ENST00000589764 1148 ntBASIC17.03■□□□□ 0.32
CBX6O95503 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CBX6O95503 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.03■□□□□ 0.32
CBX6O95503 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CBX6O95503 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.03■□□□□ 0.32
CBX6O95503 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.03■□□□□ 0.32
CBX6O95503 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CBX6O95503 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CBX6O95503 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.03■□□□□ 0.32
CBX6O95503 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CBX6O95503 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX6O95503 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX6O95503 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX6O95503 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX6O95503 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.03■□□□□ 0.32
CBX6O95503 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.03■□□□□ 0.32
CBX6O95503 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CBX6O95503 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CBX6O95503 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.03■□□□□ 0.32
CBX6O95503 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX6O95503 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CBX6O95503 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CBX6O95503 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CBX6O95503 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CBX6O95503 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.02■□□□□ 0.32
CBX6O95503 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CBX6O95503 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.02■□□□□ 0.32
CBX6O95503 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CBX6O95503 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.02■□□□□ 0.32
CBX6O95503 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.02■□□□□ 0.32
CBX6O95503 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CBX6O95503 AC005052.1-201ENST00000625181 2492 ntBASIC17.02■□□□□ 0.32
CBX6O95503 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CBX6O95503 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CBX6O95503 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CBX6O95503 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CBX6O95503 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.02■□□□□ 0.32
CBX6O95503 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.02■□□□□ 0.32
CBX6O95503 KRT8P26-201ENST00000534154 1276 ntBASIC17.02■□□□□ 0.32
CBX6O95503 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.02■□□□□ 0.32
CBX6O95503 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CBX6O95503 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CBX6O95503 GPALPP1-207ENST00000611650 899 ntBASIC17.02■□□□□ 0.32
CBX6O95503 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CBX6O95503 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CBX6O95503 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms