Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LTN1O94822 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC22.25■■□□□ 1.15
LTN1O94822 MTND6P24-201ENST00000440466 518 ntBASIC22.25■■□□□ 1.15
LTN1O94822 STOM-203ENST00000538954 1257 ntTSL 5 BASIC22.25■■□□□ 1.15
LTN1O94822 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC22.25■■□□□ 1.15
LTN1O94822 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC22.25■■□□□ 1.15
LTN1O94822 NEFHP1-201ENST00000412845 2629 ntBASIC22.25■■□□□ 1.15
LTN1O94822 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LTN1O94822 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC22.25■■□□□ 1.15
LTN1O94822 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LTN1O94822 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC22.25■■□□□ 1.15
LTN1O94822 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LTN1O94822 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LTN1O94822 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC22.25■■□□□ 1.15
LTN1O94822 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
LTN1O94822 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC22.25■■□□□ 1.15
LTN1O94822 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC22.25■■□□□ 1.15
LTN1O94822 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LTN1O94822 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LTN1O94822 AC013467.2-201ENST00000605472 835 ntBASIC22.25■■□□□ 1.15
LTN1O94822 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LTN1O94822 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC22.25■■□□□ 1.15
LTN1O94822 CETN4P-206ENST00000642099 2168 ntBASIC22.25■■□□□ 1.15
LTN1O94822 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LTN1O94822 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LTN1O94822 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LTN1O94822 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
LTN1O94822 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LTN1O94822 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
LTN1O94822 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
LTN1O94822 LINC02012-201ENST00000608206 1725 ntBASIC22.24■■□□□ 1.15
LTN1O94822 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LTN1O94822 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LTN1O94822 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC22.24■■□□□ 1.15
LTN1O94822 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC22.24■■□□□ 1.15
LTN1O94822 REEP4-207ENST00000523293 913 ntTSL 3 BASIC22.24■■□□□ 1.15
LTN1O94822 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LTN1O94822 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LTN1O94822 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LTN1O94822 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LTN1O94822 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
LTN1O94822 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LTN1O94822 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LTN1O94822 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LTN1O94822 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
LTN1O94822 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LTN1O94822 PIN1P1-201ENST00000412108 996 ntBASIC22.23■■□□□ 1.15
LTN1O94822 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC22.23■■□□□ 1.15
LTN1O94822 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC22.23■■□□□ 1.15
LTN1O94822 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC22.23■■□□□ 1.15
LTN1O94822 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LTN1O94822 AC104794.3-201ENST00000566840 1248 ntBASIC22.23■■□□□ 1.15
LTN1O94822 RNA5-8SN1-201ENST00000610460 153 ntBASIC22.23■■□□□ 1.15
LTN1O94822 RNA5-8SN5-202ENST00000612463 153 ntBASIC22.23■■□□□ 1.15
LTN1O94822 RNA5-8SN4-201ENST00000613359 153 ntBASIC22.23■■□□□ 1.15
LTN1O94822 RNA5-8SN5-201ENST00000619471 153 ntBASIC22.23■■□□□ 1.15
LTN1O94822 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC22.23■■□□□ 1.15
LTN1O94822 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
LTN1O94822 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC22.23■■□□□ 1.15
LTN1O94822 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LTN1O94822 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LTN1O94822 FST-202ENST00000396947 2538 ntTSL 5 BASIC22.23■■□□□ 1.15
LTN1O94822 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LTN1O94822 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LTN1O94822 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LTN1O94822 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LTN1O94822 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
LTN1O94822 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LTN1O94822 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
LTN1O94822 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LTN1O94822 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LTN1O94822 QPRT-203ENST00000562473 579 ntTSL 3 BASIC22.22■■□□□ 1.15
LTN1O94822 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC22.22■■□□□ 1.15
LTN1O94822 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC22.22■■□□□ 1.15
LTN1O94822 GOLGA2P9-201ENST00000596977 1937 ntBASIC22.22■■□□□ 1.15
LTN1O94822 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
LTN1O94822 AC063926.2-201ENST00000623766 1308 ntBASIC22.22■■□□□ 1.15
LTN1O94822 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
LTN1O94822 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC22.22■■□□□ 1.15
LTN1O94822 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
LTN1O94822 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LTN1O94822 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LTN1O94822 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
LTN1O94822 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LTN1O94822 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
LTN1O94822 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LTN1O94822 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
LTN1O94822 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LTN1O94822 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LTN1O94822 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC22.22■■□□□ 1.15
LTN1O94822 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC22.22■■□□□ 1.15
LTN1O94822 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LTN1O94822 AL512361.1-201ENST00000554200 418 ntBASIC22.22■■□□□ 1.15
LTN1O94822 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC22.22■■□□□ 1.15
LTN1O94822 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC22.22■■□□□ 1.15
LTN1O94822 RPS15-212ENST00000593052 629 ntTSL 2 BASIC22.22■■□□□ 1.15
LTN1O94822 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LTN1O94822 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LTN1O94822 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LTN1O94822 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms