Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN11O75508 AP001094.4-201ENST00000579008 2176 ntBASIC17.35■□□□□ 0.37
CLDN11O75508 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN11O75508 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN11O75508 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN11O75508 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.35■□□□□ 0.37
CLDN11O75508 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.35■□□□□ 0.37
CLDN11O75508 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.35■□□□□ 0.37
CLDN11O75508 AC092865.5-201ENST00000545435 363 ntBASIC17.35■□□□□ 0.37
CLDN11O75508 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.35■□□□□ 0.37
CLDN11O75508 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN11O75508 AL031432.2-201ENST00000566714 459 ntBASIC17.35■□□□□ 0.37
CLDN11O75508 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.35■□□□□ 0.37
CLDN11O75508 AL928711.1-201ENST00000570165 459 ntBASIC17.35■□□□□ 0.37
CLDN11O75508 MPDU1-223ENST00000582151 728 ntBASIC17.35■□□□□ 0.37
CLDN11O75508 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN11O75508 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN11O75508 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN11O75508 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CLDN11O75508 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN11O75508 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN11O75508 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN11O75508 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN11O75508 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN11O75508 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN11O75508 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN11O75508 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN11O75508 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN11O75508 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN11O75508 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN11O75508 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN11O75508 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN11O75508 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN11O75508 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN11O75508 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN11O75508 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN11O75508 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CLDN11O75508 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
CLDN11O75508 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CLDN11O75508 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN11O75508 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN11O75508 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN11O75508 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN11O75508 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN11O75508 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
CLDN11O75508 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.34■□□□□ 0.37
CLDN11O75508 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN11O75508 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CLDN11O75508 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN11O75508 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CLDN11O75508 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN11O75508 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLDN11O75508 KRT18P13-201ENST00000400056 1290 ntBASIC17.34■□□□□ 0.37
CLDN11O75508 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN11O75508 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
CLDN11O75508 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN11O75508 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN11O75508 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.34■□□□□ 0.37
CLDN11O75508 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.34■□□□□ 0.37
CLDN11O75508 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN11O75508 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.34■□□□□ 0.37
CLDN11O75508 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN11O75508 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN11O75508 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
CLDN11O75508 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN11O75508 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN11O75508 AC012569.1-201ENST00000591191 1524 ntBASIC17.34■□□□□ 0.37
CLDN11O75508 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
CLDN11O75508 AP001350.2-201ENST00000625104 1094 ntBASIC17.34■□□□□ 0.37
CLDN11O75508 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.34■□□□□ 0.37
CLDN11O75508 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CLDN11O75508 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN11O75508 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CLDN11O75508 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN11O75508 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN11O75508 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.33■□□□□ 0.37
CLDN11O75508 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN11O75508 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN11O75508 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN11O75508 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN11O75508 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CLDN11O75508 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN11O75508 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN11O75508 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN11O75508 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN11O75508 AL121761.2-201ENST00000598007 1648 ntBASIC17.33■□□□□ 0.37
CLDN11O75508 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN11O75508 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN11O75508 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN11O75508 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN11O75508 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN11O75508 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN11O75508 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN11O75508 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.33■□□□□ 0.36
CLDN11O75508 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN11O75508 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN11O75508 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN11O75508 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN11O75508 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CLDN11O75508 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms