Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
OPHN1O60890 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
OPHN1O60890 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
OPHN1O60890 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
OPHN1O60890 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
OPHN1O60890 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
OPHN1O60890 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
OPHN1O60890 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
OPHN1O60890 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
OPHN1O60890 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
OPHN1O60890 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
OPHN1O60890 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
OPHN1O60890 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
OPHN1O60890 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
OPHN1O60890 AC098831.1-202ENST00000438821 336 ntBASIC17.82■□□□□ 0.44
OPHN1O60890 AL591424.1-201ENST00000442569 1213 ntBASIC17.82■□□□□ 0.44
OPHN1O60890 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
OPHN1O60890 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.82■□□□□ 0.44
OPHN1O60890 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.82■□□□□ 0.44
OPHN1O60890 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.82■□□□□ 0.44
OPHN1O60890 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.82■□□□□ 0.44
OPHN1O60890 AL139424.1-201ENST00000607572 797 ntBASIC17.82■□□□□ 0.44
OPHN1O60890 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.82■□□□□ 0.44
OPHN1O60890 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
OPHN1O60890 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
OPHN1O60890 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
OPHN1O60890 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
OPHN1O60890 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
OPHN1O60890 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
OPHN1O60890 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
OPHN1O60890 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.82■□□□□ 0.44
OPHN1O60890 AL353593.2-201ENST00000602529 1483 ntBASIC17.82■□□□□ 0.44
OPHN1O60890 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.81■□□□□ 0.44
OPHN1O60890 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
OPHN1O60890 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
OPHN1O60890 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
OPHN1O60890 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.81■□□□□ 0.44
OPHN1O60890 AD000864.1-201ENST00000624076 2295 ntBASIC17.81■□□□□ 0.44
OPHN1O60890 AC046158.3-201ENST00000624947 2558 ntBASIC17.81■□□□□ 0.44
OPHN1O60890 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.81■□□□□ 0.44
OPHN1O60890 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
OPHN1O60890 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
OPHN1O60890 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.81■□□□□ 0.44
OPHN1O60890 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.81■□□□□ 0.44
OPHN1O60890 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.81■□□□□ 0.44
OPHN1O60890 UPF3AP3-201ENST00000420996 769 ntBASIC17.81■□□□□ 0.44
OPHN1O60890 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
OPHN1O60890 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.81■□□□□ 0.44
OPHN1O60890 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.81■□□□□ 0.44
OPHN1O60890 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.81■□□□□ 0.44
OPHN1O60890 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.81■□□□□ 0.44
OPHN1O60890 AL356488.2-201ENST00000602755 427 ntBASIC17.81■□□□□ 0.44
OPHN1O60890 AC140113.2-201ENST00000604370 208 ntBASIC17.81■□□□□ 0.44
OPHN1O60890 AP001269.4-201ENST00000609611 512 ntBASIC17.81■□□□□ 0.44
OPHN1O60890 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
OPHN1O60890 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
OPHN1O60890 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
OPHN1O60890 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.81■□□□□ 0.44
OPHN1O60890 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
OPHN1O60890 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
OPHN1O60890 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
OPHN1O60890 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.81■□□□□ 0.44
OPHN1O60890 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
OPHN1O60890 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.81■□□□□ 0.44
OPHN1O60890 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
OPHN1O60890 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
OPHN1O60890 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
OPHN1O60890 AC018695.7-201ENST00000624587 2492 ntBASIC17.8■□□□□ 0.44
OPHN1O60890 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.8■□□□□ 0.44
OPHN1O60890 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
OPHN1O60890 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
OPHN1O60890 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.8■□□□□ 0.44
OPHN1O60890 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.8■□□□□ 0.44
OPHN1O60890 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
OPHN1O60890 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
OPHN1O60890 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
OPHN1O60890 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
OPHN1O60890 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
OPHN1O60890 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
OPHN1O60890 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
OPHN1O60890 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.8■□□□□ 0.44
OPHN1O60890 SLC25A1P3-201ENST00000395415 828 ntBASIC17.8■□□□□ 0.44
OPHN1O60890 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
OPHN1O60890 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.8■□□□□ 0.44
OPHN1O60890 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.8■□□□□ 0.44
OPHN1O60890 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.8■□□□□ 0.44
OPHN1O60890 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
OPHN1O60890 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.8■□□□□ 0.44
OPHN1O60890 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.8■□□□□ 0.44
OPHN1O60890 MIR3687-2-201ENST00000577708 61 ntBASIC17.8■□□□□ 0.44
OPHN1O60890 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
OPHN1O60890 MIR3687-1-201ENST00000614492 61 ntBASIC17.8■□□□□ 0.44
OPHN1O60890 AC055717.3-201ENST00000622967 595 ntBASIC17.8■□□□□ 0.44
OPHN1O60890 AC079781.4-201ENST00000641908 219 ntBASIC17.8■□□□□ 0.44
OPHN1O60890 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.8■□□□□ 0.44
OPHN1O60890 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
OPHN1O60890 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.8■□□□□ 0.44
OPHN1O60890 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
OPHN1O60890 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
OPHN1O60890 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms