Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.28■□□□□ 0.04
ZIC3O60481 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZIC3O60481 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZIC3O60481 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ZIC3O60481 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZIC3O60481 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZIC3O60481 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZIC3O60481 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZIC3O60481 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ZIC3O60481 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZIC3O60481 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZIC3O60481 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.27■□□□□ 0.04
ZIC3O60481 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZIC3O60481 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZIC3O60481 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.27■□□□□ 0.04
ZIC3O60481 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZIC3O60481 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZIC3O60481 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZIC3O60481 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.27■□□□□ 0.04
ZIC3O60481 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZIC3O60481 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZIC3O60481 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.27■□□□□ 0.04
ZIC3O60481 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZIC3O60481 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZIC3O60481 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.27■□□□□ 0.04
ZIC3O60481 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZIC3O60481 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZIC3O60481 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZIC3O60481 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
ZIC3O60481 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.27■□□□□ 0.04
ZIC3O60481 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.27■□□□□ 0.04
ZIC3O60481 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZIC3O60481 HMGA1P7-201ENST00000406908 502 ntBASIC15.27■□□□□ 0.04
ZIC3O60481 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.27■□□□□ 0.04
ZIC3O60481 AC112482.1-201ENST00000492080 688 ntBASIC15.27■□□□□ 0.04
ZIC3O60481 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZIC3O60481 AL031432.2-201ENST00000566714 459 ntBASIC15.27■□□□□ 0.04
ZIC3O60481 AL928711.1-201ENST00000570165 459 ntBASIC15.27■□□□□ 0.04
ZIC3O60481 MIR4492-201ENST00000581627 80 ntBASIC15.27■□□□□ 0.04
ZIC3O60481 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZIC3O60481 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
ZIC3O60481 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.27■□□□□ 0.04
ZIC3O60481 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZIC3O60481 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
ZIC3O60481 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZIC3O60481 AL121761.2-201ENST00000598007 1648 ntBASIC15.27■□□□□ 0.03
ZIC3O60481 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
ZIC3O60481 PCDHB17P-201ENST00000539533 2393 ntBASIC15.27■□□□□ 0.03
ZIC3O60481 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ZIC3O60481 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
ZIC3O60481 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZIC3O60481 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZIC3O60481 AC012569.1-201ENST00000591191 1524 ntBASIC15.27■□□□□ 0.03
ZIC3O60481 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZIC3O60481 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ZIC3O60481 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ZIC3O60481 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZIC3O60481 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZIC3O60481 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZIC3O60481 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZIC3O60481 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZIC3O60481 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
ZIC3O60481 AC012313.1-201ENST00000593393 3059 ntBASIC15.26■□□□□ 0.03
ZIC3O60481 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZIC3O60481 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ZIC3O60481 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ZIC3O60481 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZIC3O60481 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZIC3O60481 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZIC3O60481 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.26■□□□□ 0.03
ZIC3O60481 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZIC3O60481 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ZIC3O60481 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZIC3O60481 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZIC3O60481 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZIC3O60481 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.26■□□□□ 0.03
ZIC3O60481 KRT18P13-201ENST00000400056 1290 ntBASIC15.26■□□□□ 0.03
ZIC3O60481 RPSAP43-201ENST00000402237 625 ntBASIC15.26■□□□□ 0.03
ZIC3O60481 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.26■□□□□ 0.03
ZIC3O60481 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.26■□□□□ 0.03
ZIC3O60481 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.26■□□□□ 0.03
ZIC3O60481 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZIC3O60481 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZIC3O60481 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.26■□□□□ 0.03
ZIC3O60481 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZIC3O60481 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZIC3O60481 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ZIC3O60481 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZIC3O60481 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZIC3O60481 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.26■□□□□ 0.03
ZIC3O60481 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZIC3O60481 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.26■□□□□ 0.03
ZIC3O60481 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZIC3O60481 AC131009.4-201ENST00000624048 1740 ntBASIC15.26■□□□□ 0.03
ZIC3O60481 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ZIC3O60481 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZIC3O60481 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.25■□□□□ 0.03
ZIC3O60481 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZIC3O60481 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ZIC3O60481 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms