Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2AO43633 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2AO43633 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CHMP2AO43633 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2AO43633 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2AO43633 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2AO43633 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2AO43633 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CHMP2AO43633 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2AO43633 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.14■□□□□ 0.65
CHMP2AO43633 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP2AO43633 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP2AO43633 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.13■□□□□ 0.65
CHMP2AO43633 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.13■□□□□ 0.65
CHMP2AO43633 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP2AO43633 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CHMP2AO43633 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.13■□□□□ 0.65
CHMP2AO43633 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP2AO43633 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CHMP2AO43633 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP2AO43633 BX842568.4-201ENST00000421222 227 ntBASIC19.13■□□□□ 0.65
CHMP2AO43633 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.13■□□□□ 0.65
CHMP2AO43633 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.13■□□□□ 0.65
CHMP2AO43633 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CHMP2AO43633 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.13■□□□□ 0.65
CHMP2AO43633 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.13■□□□□ 0.65
CHMP2AO43633 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.13■□□□□ 0.65
CHMP2AO43633 ACTL9-202ENST00000612068 1252 ntBASIC19.13■□□□□ 0.65
CHMP2AO43633 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.13■□□□□ 0.65
CHMP2AO43633 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.13■□□□□ 0.65
CHMP2AO43633 BCAR1-209ENST00000546196 1340 ntBASIC19.13■□□□□ 0.65
CHMP2AO43633 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP2AO43633 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP2AO43633 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CHMP2AO43633 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP2AO43633 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP2AO43633 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.13■□□□□ 0.65
CHMP2AO43633 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP2AO43633 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP2AO43633 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP2AO43633 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP2AO43633 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CHMP2AO43633 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2AO43633 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2AO43633 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2AO43633 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.12■□□□□ 0.65
CHMP2AO43633 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.12■□□□□ 0.65
CHMP2AO43633 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
CHMP2AO43633 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.12■□□□□ 0.65
CHMP2AO43633 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CHMP2AO43633 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.12■□□□□ 0.65
CHMP2AO43633 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2AO43633 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2AO43633 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.12■□□□□ 0.65
CHMP2AO43633 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2AO43633 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2AO43633 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2AO43633 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.12■□□□□ 0.65
CHMP2AO43633 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.12■□□□□ 0.65
CHMP2AO43633 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CHMP2AO43633 AC096734.2-201ENST00000562054 433 ntBASIC19.12■□□□□ 0.65
CHMP2AO43633 AC004877.2-201ENST00000623941 599 ntBASIC19.12■□□□□ 0.65
CHMP2AO43633 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2AO43633 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2AO43633 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2AO43633 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
CHMP2AO43633 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2AO43633 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.12■□□□□ 0.65
CHMP2AO43633 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2AO43633 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2AO43633 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2AO43633 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2AO43633 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2AO43633 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CHMP2AO43633 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CHMP2AO43633 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP2AO43633 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CHMP2AO43633 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.11■□□□□ 0.65
CHMP2AO43633 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.11■□□□□ 0.65
CHMP2AO43633 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP2AO43633 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP2AO43633 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP2AO43633 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.11■□□□□ 0.65
CHMP2AO43633 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP2AO43633 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP2AO43633 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP2AO43633 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP2AO43633 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.11■□□□□ 0.65
CHMP2AO43633 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP2AO43633 FAM185BP-201ENST00000443595 716 ntBASIC19.11■□□□□ 0.65
CHMP2AO43633 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.11■□□□□ 0.65
CHMP2AO43633 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.11■□□□□ 0.65
CHMP2AO43633 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.11■□□□□ 0.65
CHMP2AO43633 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.11■□□□□ 0.65
CHMP2AO43633 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.11■□□□□ 0.65
CHMP2AO43633 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.11■□□□□ 0.65
CHMP2AO43633 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.11■□□□□ 0.65
CHMP2AO43633 AC060834.1-201ENST00000443027 2032 ntBASIC19.11■□□□□ 0.65
CHMP2AO43633 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP2AO43633 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms