Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN1O15353 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN1O15353 AC012313.1-201ENST00000593393 3059 ntBASIC20.29■□□□□ 0.84
FOXN1O15353 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
FOXN1O15353 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
FOXN1O15353 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXN1O15353 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.29■□□□□ 0.84
FOXN1O15353 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
FOXN1O15353 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN1O15353 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN1O15353 AC148477.5-201ENST00000625164 1645 ntBASIC20.29■□□□□ 0.84
FOXN1O15353 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN1O15353 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
FOXN1O15353 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXN1O15353 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXN1O15353 ACA64.2-201ENST00000459014 129 ntBASIC20.29■□□□□ 0.84
FOXN1O15353 AC004890.2-204ENST00000481968 304 ntBASIC20.29■□□□□ 0.84
FOXN1O15353 GIMAP3P-201ENST00000495150 836 ntBASIC20.29■□□□□ 0.84
FOXN1O15353 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN1O15353 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN1O15353 RETN-203ENST00000629642 400 ntTSL 5 BASIC20.29■□□□□ 0.84
FOXN1O15353 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN1O15353 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN1O15353 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN1O15353 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN1O15353 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN1O15353 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN1O15353 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXN1O15353 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
FOXN1O15353 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN1O15353 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.28■□□□□ 0.84
FOXN1O15353 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN1O15353 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.28■□□□□ 0.84
FOXN1O15353 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN1O15353 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN1O15353 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN1O15353 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
FOXN1O15353 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN1O15353 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
FOXN1O15353 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN1O15353 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.28■□□□□ 0.84
FOXN1O15353 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN1O15353 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
FOXN1O15353 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN1O15353 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN1O15353 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN1O15353 CALY-202ENST00000368555 783 ntTSL 2 BASIC20.28■□□□□ 0.84
FOXN1O15353 MIR658-201ENST00000385210 100 ntBASIC20.28■□□□□ 0.84
FOXN1O15353 AC079776.1-201ENST00000401540 1152 ntBASIC20.28■□□□□ 0.84
FOXN1O15353 NME6-203ENST00000415644 849 ntTSL 2 BASIC20.28■□□□□ 0.84
FOXN1O15353 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC20.28■□□□□ 0.84
FOXN1O15353 AC079140.1-201ENST00000508039 487 ntBASIC20.28■□□□□ 0.84
FOXN1O15353 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.28■□□□□ 0.84
FOXN1O15353 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.28■□□□□ 0.84
FOXN1O15353 MIR6805-201ENST00000615055 62 ntBASIC20.28■□□□□ 0.84
FOXN1O15353 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC20.28■□□□□ 0.84
FOXN1O15353 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN1O15353 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.28■□□□□ 0.84
FOXN1O15353 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN1O15353 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.28■□□□□ 0.84
FOXN1O15353 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.28■□□□□ 0.84
FOXN1O15353 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
FOXN1O15353 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FOXN1O15353 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXN1O15353 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXN1O15353 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
FOXN1O15353 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
FOXN1O15353 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXN1O15353 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXN1O15353 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FOXN1O15353 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
FOXN1O15353 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
FOXN1O15353 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.27■□□□□ 0.84
FOXN1O15353 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
FOXN1O15353 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.27■□□□□ 0.84
FOXN1O15353 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXN1O15353 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FOXN1O15353 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXN1O15353 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
FOXN1O15353 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.27■□□□□ 0.84
FOXN1O15353 AC069120.2-201ENST00000524091 540 ntBASIC20.27■□□□□ 0.84
FOXN1O15353 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.27■□□□□ 0.84
FOXN1O15353 FAM86C2P-203ENST00000528684 1004 ntBASIC20.27■□□□□ 0.84
FOXN1O15353 FAM8A2P-201ENST00000528813 1142 ntBASIC20.27■□□□□ 0.84
FOXN1O15353 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FOXN1O15353 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FOXN1O15353 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FOXN1O15353 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXN1O15353 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXN1O15353 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
FOXN1O15353 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
FOXN1O15353 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
FOXN1O15353 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.27■□□□□ 0.83
FOXN1O15353 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
FOXN1O15353 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
FOXN1O15353 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXN1O15353 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
FOXN1O15353 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FOXN1O15353 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXN1O15353 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms