Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.43■□□□□ 0.7
ATP2A1O14983 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ATP2A1O14983 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP2A1O14983 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2A1O14983 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2A1O14983 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP2A1O14983 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.43■□□□□ 0.7
ATP2A1O14983 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2A1O14983 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A1O14983 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A1O14983 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A1O14983 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A1O14983 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A1O14983 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A1O14983 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A1O14983 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A1O14983 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A1O14983 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A1O14983 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.42■□□□□ 0.7
ATP2A1O14983 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A1O14983 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A1O14983 AC069335.1-201ENST00000489972 472 ntBASIC19.42■□□□□ 0.7
ATP2A1O14983 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.42■□□□□ 0.7
ATP2A1O14983 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.42■□□□□ 0.7
ATP2A1O14983 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ATP2A1O14983 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
ATP2A1O14983 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.42■□□□□ 0.7
ATP2A1O14983 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.42■□□□□ 0.7
ATP2A1O14983 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.42■□□□□ 0.7
ATP2A1O14983 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.42■□□□□ 0.7
ATP2A1O14983 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.42■□□□□ 0.7
ATP2A1O14983 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ATP2A1O14983 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A1O14983 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A1O14983 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A1O14983 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A1O14983 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A1O14983 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.42■□□□□ 0.7
ATP2A1O14983 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A1O14983 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A1O14983 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A1O14983 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
ATP2A1O14983 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.41■□□□□ 0.7
ATP2A1O14983 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A1O14983 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.41■□□□□ 0.7
ATP2A1O14983 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A1O14983 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A1O14983 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A1O14983 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A1O14983 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ATP2A1O14983 RNU1-129P-201ENST00000384064 167 ntBASIC19.41■□□□□ 0.7
ATP2A1O14983 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.41■□□□□ 0.7
ATP2A1O14983 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.41■□□□□ 0.7
ATP2A1O14983 AC005237.2-201ENST00000434368 219 ntBASIC19.41■□□□□ 0.7
ATP2A1O14983 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.41■□□□□ 0.7
ATP2A1O14983 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A1O14983 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A1O14983 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A1O14983 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A1O14983 U1.21-201ENST00000580816 167 ntBASIC19.41■□□□□ 0.7
ATP2A1O14983 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A1O14983 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.41■□□□□ 0.7
ATP2A1O14983 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.41■□□□□ 0.7
ATP2A1O14983 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A1O14983 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A1O14983 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A1O14983 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.41■□□□□ 0.7
ATP2A1O14983 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A1O14983 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A1O14983 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ATP2A1O14983 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A1O14983 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A1O14983 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A1O14983 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A1O14983 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.41■□□□□ 0.7
ATP2A1O14983 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2A1O14983 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
ATP2A1O14983 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2A1O14983 GPS2P2-201ENST00000430745 888 ntBASIC19.4■□□□□ 0.7
ATP2A1O14983 SPCS2P4-201ENST00000436160 681 ntBASIC19.4■□□□□ 0.7
ATP2A1O14983 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP2A1O14983 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP2A1O14983 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP2A1O14983 KRT8P23-201ENST00000560090 1207 ntBASIC19.4■□□□□ 0.7
ATP2A1O14983 SPCS2P1-201ENST00000561636 679 ntBASIC19.4■□□□□ 0.7
ATP2A1O14983 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP2A1O14983 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2A1O14983 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.4■□□□□ 0.7
ATP2A1O14983 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2A1O14983 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2A1O14983 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2A1O14983 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2A1O14983 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP2A1O14983 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2A1O14983 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.4■□□□□ 0.7
ATP2A1O14983 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP2A1O14983 LETM1P2-201ENST00000597330 2178 ntBASIC19.4■□□□□ 0.7
ATP2A1O14983 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2A1O14983 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
ATP2A1O14983 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms