Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CHD1O14646 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CHD1O14646 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CHD1O14646 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CHD1O14646 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC27.03■■□□□ 1.92
CHD1O14646 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC27.03■■□□□ 1.92
CHD1O14646 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CHD1O14646 FO681548.1-201ENST00000455617 1132 ntBASIC27.03■■□□□ 1.92
CHD1O14646 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC27.03■■□□□ 1.92
CHD1O14646 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC27.03■■□□□ 1.92
CHD1O14646 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CHD1O14646 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
CHD1O14646 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC27.03■■□□□ 1.92
CHD1O14646 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
CHD1O14646 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC27.03■■□□□ 1.92
CHD1O14646 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC27.03■■□□□ 1.92
CHD1O14646 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC27.03■■□□□ 1.92
CHD1O14646 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
CHD1O14646 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CHD1O14646 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC27.02■■□□□ 1.92
CHD1O14646 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC27.02■■□□□ 1.92
CHD1O14646 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC27.02■■□□□ 1.92
CHD1O14646 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CHD1O14646 APRT-204ENST00000563655 709 ntTSL 5 BASIC27.02■■□□□ 1.92
CHD1O14646 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC27.02■■□□□ 1.92
CHD1O14646 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC27.02■■□□□ 1.92
CHD1O14646 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
CHD1O14646 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CHD1O14646 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC27.02■■□□□ 1.92
CHD1O14646 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CHD1O14646 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CHD1O14646 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
CHD1O14646 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC27.02■■□□□ 1.92
CHD1O14646 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
CHD1O14646 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CHD1O14646 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC27.02■■□□□ 1.92
CHD1O14646 PFN1P12-201ENST00000455938 534 ntBASIC27.02■■□□□ 1.92
CHD1O14646 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC27.02■■□□□ 1.92
CHD1O14646 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC27.02■■□□□ 1.92
CHD1O14646 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CHD1O14646 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHD1O14646 FOS-208ENST00000555686 1496 ntTSL 2 BASIC27.01■■□□□ 1.91
CHD1O14646 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHD1O14646 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC27.01■■□□□ 1.91
CHD1O14646 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CHD1O14646 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHD1O14646 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHD1O14646 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CHD1O14646 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC27.01■■□□□ 1.91
CHD1O14646 RHOA-206ENST00000454011 889 ntTSL 2 BASIC27.01■■□□□ 1.91
CHD1O14646 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC27.01■■□□□ 1.91
CHD1O14646 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC27.01■■□□□ 1.91
CHD1O14646 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC27.01■■□□□ 1.91
CHD1O14646 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHD1O14646 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CHD1O14646 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CHD1O14646 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC27■■□□□ 1.91
CHD1O14646 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
CHD1O14646 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC27■■□□□ 1.91
CHD1O14646 AL162726.2-201ENST00000438986 1017 ntBASIC27■■□□□ 1.91
CHD1O14646 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC27■■□□□ 1.91
CHD1O14646 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC27■■□□□ 1.91
CHD1O14646 AC106872.11-201ENST00000605838 421 ntBASIC27■■□□□ 1.91
CHD1O14646 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC27■■□□□ 1.91
CHD1O14646 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC27■■□□□ 1.91
CHD1O14646 FLJ13224-201ENST00000313737 1514 ntBASIC27■■□□□ 1.91
CHD1O14646 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC27■■□□□ 1.91
CHD1O14646 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
CHD1O14646 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CHD1O14646 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC27■■□□□ 1.91
CHD1O14646 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC27■■□□□ 1.91
CHD1O14646 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CHD1O14646 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC26.99■■□□□ 1.91
CHD1O14646 AGER-203ENST00000375065 665 ntTSL 2 BASIC26.99■■□□□ 1.91
CHD1O14646 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC26.99■■□□□ 1.91
CHD1O14646 BTNL10-201ENST00000595971 695 ntBASIC26.99■■□□□ 1.91
CHD1O14646 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CHD1O14646 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
CHD1O14646 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CHD1O14646 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC26.99■■□□□ 1.91
CHD1O14646 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
CHD1O14646 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
CHD1O14646 RPL7P3-201ENST00000441388 714 ntBASIC26.99■■□□□ 1.91
CHD1O14646 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC26.99■■□□□ 1.91
CHD1O14646 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC26.99■■□□□ 1.91
CHD1O14646 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC26.99■■□□□ 1.91
CHD1O14646 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC26.99■■□□□ 1.91
CHD1O14646 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC26.98■■□□□ 1.91
CHD1O14646 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CHD1O14646 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC26.98■■□□□ 1.91
CHD1O14646 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CHD1O14646 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC26.98■■□□□ 1.91
CHD1O14646 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC26.98■■□□□ 1.91
CHD1O14646 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC26.98■■□□□ 1.91
CHD1O14646 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC26.98■■□□□ 1.91
CHD1O14646 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC26.98■■□□□ 1.91
CHD1O14646 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC26.98■■□□□ 1.91
CHD1O14646 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
CHD1O14646 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC26.98■■□□□ 1.91
CHD1O14646 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC26.98■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms