Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC7O00311 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
CDC7O00311 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.73■□□□□ 0.27
CDC7O00311 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC7O00311 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.73■□□□□ 0.27
CDC7O00311 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDC7O00311 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDC7O00311 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.73■□□□□ 0.27
CDC7O00311 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.73■□□□□ 0.27
CDC7O00311 TUBB8P12-201ENST00000308911 1335 ntBASIC16.72■□□□□ 0.27
CDC7O00311 TUBB7P-202ENST00000428444 1305 ntBASIC16.72■□□□□ 0.27
CDC7O00311 TUBB8P7-204ENST00000567960 1332 ntBASIC16.72■□□□□ 0.27
CDC7O00311 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC7O00311 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC7O00311 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC7O00311 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
CDC7O00311 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDC7O00311 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC7O00311 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC7O00311 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC7O00311 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDC7O00311 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC7O00311 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDC7O00311 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC7O00311 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.72■□□□□ 0.27
CDC7O00311 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.72■□□□□ 0.27
CDC7O00311 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CDC7O00311 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDC7O00311 CLEC4GP1-201ENST00000596555 870 ntBASIC16.72■□□□□ 0.27
CDC7O00311 REXO1L6P-202ENST00000619970 1078 ntBASIC16.72■□□□□ 0.27
CDC7O00311 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC7O00311 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC7O00311 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CDC7O00311 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDC7O00311 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDC7O00311 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC7O00311 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.72■□□□□ 0.27
CDC7O00311 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.72■□□□□ 0.27
CDC7O00311 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.72■□□□□ 0.27
CDC7O00311 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC7O00311 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.71■□□□□ 0.27
CDC7O00311 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CDC7O00311 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDC7O00311 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.71■□□□□ 0.27
CDC7O00311 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.71■□□□□ 0.27
CDC7O00311 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDC7O00311 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.71■□□□□ 0.27
CDC7O00311 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDC7O00311 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDC7O00311 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDC7O00311 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CDC7O00311 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDC7O00311 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CDC7O00311 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDC7O00311 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CDC7O00311 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.71■□□□□ 0.27
CDC7O00311 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.71■□□□□ 0.27
CDC7O00311 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CDC7O00311 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDC7O00311 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.71■□□□□ 0.27
CDC7O00311 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CDC7O00311 MTDHP4-201ENST00000600287 670 ntBASIC16.71■□□□□ 0.27
CDC7O00311 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.71■□□□□ 0.27
CDC7O00311 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDC7O00311 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDC7O00311 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDC7O00311 AL603756.1-201ENST00000606511 2163 ntBASIC16.71■□□□□ 0.27
CDC7O00311 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.71■□□□□ 0.26
CDC7O00311 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.7■□□□□ 0.26
CDC7O00311 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC7O00311 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC7O00311 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDC7O00311 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.7■□□□□ 0.26
CDC7O00311 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
CDC7O00311 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
CDC7O00311 TNRC18P3-201ENST00000441896 2691 ntBASIC16.7■□□□□ 0.26
CDC7O00311 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDC7O00311 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.7■□□□□ 0.26
CDC7O00311 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.7■□□□□ 0.26
CDC7O00311 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDC7O00311 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC7O00311 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.7■□□□□ 0.26
CDC7O00311 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.7■□□□□ 0.26
CDC7O00311 AF238378.1-201ENST00000526806 358 ntBASIC16.7■□□□□ 0.26
CDC7O00311 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.7■□□□□ 0.26
CDC7O00311 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.7■□□□□ 0.26
CDC7O00311 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.7■□□□□ 0.26
CDC7O00311 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.7■□□□□ 0.26
CDC7O00311 TERC-201ENST00000602385 541 ntBASIC16.7■□□□□ 0.26
CDC7O00311 AL589182.2-201ENST00000619332 1049 ntBASIC16.7■□□□□ 0.26
CDC7O00311 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC7O00311 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC7O00311 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC7O00311 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC7O00311 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CDC7O00311 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC7O00311 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CDC7O00311 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC7O00311 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC7O00311 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms