Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NACAE9PAV3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
NACAE9PAV3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NACAE9PAV3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NACAE9PAV3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
NACAE9PAV3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
NACAE9PAV3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC12.52□□□□□ -0.4
NACAE9PAV3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
NACAE9PAV3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
NACAE9PAV3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
NACAE9PAV3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.4
NACAE9PAV3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
NACAE9PAV3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NACAE9PAV3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
NACAE9PAV3 AC011270.2-201ENST00000624293 2550 ntBASIC12.52□□□□□ -0.41
NACAE9PAV3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
NACAE9PAV3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC12.52□□□□□ -0.41
NACAE9PAV3 RHBDF1P1-201ENST00000427504 1941 ntBASIC12.52□□□□□ -0.41
NACAE9PAV3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC12.52□□□□□ -0.41
NACAE9PAV3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
NACAE9PAV3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NACAE9PAV3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NACAE9PAV3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NACAE9PAV3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
NACAE9PAV3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NACAE9PAV3 AC011676.5-201ENST00000624864 2660 ntBASIC12.52□□□□□ -0.41
NACAE9PAV3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
NACAE9PAV3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
NACAE9PAV3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NACAE9PAV3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NACAE9PAV3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NACAE9PAV3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
NACAE9PAV3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NACAE9PAV3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
NACAE9PAV3 AL691432.3-201ENST00000621860 400 ntBASIC12.52□□□□□ -0.41
NACAE9PAV3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
NACAE9PAV3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NACAE9PAV3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
NACAE9PAV3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NACAE9PAV3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
NACAE9PAV3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NACAE9PAV3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NACAE9PAV3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
NACAE9PAV3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NACAE9PAV3 TNRC18P3-201ENST00000441896 2691 ntBASIC12.51□□□□□ -0.41
NACAE9PAV3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NACAE9PAV3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NACAE9PAV3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.51□□□□□ -0.41
NACAE9PAV3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NACAE9PAV3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC12.51□□□□□ -0.41
NACAE9PAV3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC12.51□□□□□ -0.41
NACAE9PAV3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NACAE9PAV3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC12.51□□□□□ -0.41
NACAE9PAV3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC12.51□□□□□ -0.41
NACAE9PAV3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.51□□□□□ -0.41
NACAE9PAV3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC12.51□□□□□ -0.41
NACAE9PAV3 AL671883.3-201ENST00000603274 991 ntBASIC12.51□□□□□ -0.41
NACAE9PAV3 AL353801.3-201ENST00000609898 542 ntBASIC12.51□□□□□ -0.41
NACAE9PAV3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NACAE9PAV3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NACAE9PAV3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
NACAE9PAV3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NACAE9PAV3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC12.51□□□□□ -0.41
NACAE9PAV3 NSUN5P1-202ENST00000421140 1535 ntBASIC12.51□□□□□ -0.41
NACAE9PAV3 NSUN5P2-203ENST00000457352 1529 ntBASIC12.51□□□□□ -0.41
NACAE9PAV3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NACAE9PAV3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NACAE9PAV3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NACAE9PAV3 AD000864.1-201ENST00000624076 2295 ntBASIC12.51□□□□□ -0.41
NACAE9PAV3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NACAE9PAV3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NACAE9PAV3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NACAE9PAV3 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
NACAE9PAV3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC12.51□□□□□ -0.41
NACAE9PAV3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
NACAE9PAV3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NACAE9PAV3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NACAE9PAV3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NACAE9PAV3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
NACAE9PAV3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
NACAE9PAV3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NACAE9PAV3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
NACAE9PAV3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NACAE9PAV3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
NACAE9PAV3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC12.5□□□□□ -0.41
NACAE9PAV3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NACAE9PAV3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NACAE9PAV3 NKILA-202ENST00000614771 2598 ntBASIC12.5□□□□□ -0.41
NACAE9PAV3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
NACAE9PAV3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
NACAE9PAV3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
NACAE9PAV3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC12.5□□□□□ -0.41
NACAE9PAV3 AC068472.1-201ENST00000474589 881 ntBASIC12.5□□□□□ -0.41
NACAE9PAV3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC12.5□□□□□ -0.41
NACAE9PAV3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NACAE9PAV3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
NACAE9PAV3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NACAE9PAV3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NACAE9PAV3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NACAE9PAV3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms