Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC106028.4-201ENST00000614509 607 ntBASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
TBC1D3FA6NER0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 GNAS-203ENST00000306120 1878 ntBASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 HMGA1P7-201ENST00000406908 502 ntBASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 AL355306.1-201ENST00000415580 579 ntBASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 AC093028.1-201ENST00000622998 982 ntBASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TBC1D3FA6NER0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 AC099522.2-201ENST00000607001 744 ntBASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 AL353732.1-201ENST00000569618 1459 ntBASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TBC1D3FA6NER0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
TBC1D3FA6NER0 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
TBC1D3FA6NER0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TBC1D3FA6NER0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TBC1D3FA6NER0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TBC1D3FA6NER0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TBC1D3FA6NER0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms